Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Porphyridium_20purpureum_20[genbank_20GCA_5F000397085.1_202013-05- 16] 3,014 sequences; 19,451,899 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq2751 87.8 2e-12 >seq2751 Length=18403 Score = 87.8 bits (96), Expect = 2e-12 Identities = 117/160 (73%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 24986 ACAAAACGGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGA 25045 |||| | | || ||||| || ||||| ||||| ||||||| || ||||||| |||| Sbjct 18244 ACAATAAGCAAGCATGCAGATTTTTGTGAAGACGCTGACCGGAAAGACCATCACGCTCGA 18303 Query 25046 AGTGGAGTCGTCTGACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGA 25104 ||||||||||| ||||| || || |||| || || | ||| ||||| || || | Sbjct 18304 GGTGGAGTCGTCCGACACGATTGATAATGTGAAGGCCAAGATTCA-GGACAAGGAGGGCA 18362 Query 25105 TTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACA 25144 | || || ||||| ||||| | ||||| ||||| || || Sbjct 18363 TCCCGCCGGACCAGCAGCGCCTGATTTTCGCCGGAAAGCA 18402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433312082508410