Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Porphyridium_20purpureum_20[genbank_20GCA_5F000397085.1_202013-05- 16] 3,014 sequences; 19,451,899 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq147 95.1 2e-14 >seq147 Length=5172 Score = 95.1 bits (104), Expect = 2e-14 Identities = 133/184 (72%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 280175 CATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCA 280234 |||||| || || || |||||||| || || | ||||| | ||||| || ||| | Sbjct 3189 CATTGGTCCGAACGGAGCGGGTAAATCGACGATCATCAAGCTACTGACGGGAGAGGTTGA 3130 Query 280235 GGCCACTGAGGGGTCC-GTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGC 280293 || | || ||| || ||||||||||| ||| || | || || ||||| |||| Sbjct 3129 ACCC-CAGATTGGTAATGTGTGGAAGCATCCGAACGCACGTGTCGCATATGTCGCACAGC 3071 Query 280294 ACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGC 280353 |||| ||||| ||||| |||| || || |||| ||| || ||||| ||||| ||||||| Sbjct 3070 ACGCGTTCCATCACATTGAGATGCATCTTGACAAGACGCCCAACCAGTACATCCAGTGGC 3011 Query 280354 GCTA 280357 | || Sbjct 3010 GGTA 3007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027797108154774