Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Porphyridium_20purpureum_20[genbank_20GCA_5F000397085.1_202013-05- 16] 3,014 sequences; 19,451,899 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq967 93.3 3e-14 >seq967 Length=23345 Score = 93.3 bits (102), Expect = 3e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 118151 GTAAAAGGCGATACACTCCGACAGTTTTCCGTCGCGACCGGCCCTTCCTATCTCTTGATA 118210 ||| ||| | ||||| || | | ||| |||||||| ||||| | ||| |||||| || Sbjct 3658 GTACAAGACAATACAATCGGCCTCTTTGCCGTCGCGTCCGGCTCGTCCAGACTCTTGGTA 3717 Query 118211 ATAACCGTCCAGTGATTTGGGCATACTGTGATGTATCACCAACCGCACGTCGGGTTTATC 118270 |||| || || |||||| ||| | || || ||||| || |||||||| ||||| || Sbjct 3718 GTAACTCTCGAGCGATTTGCTCATGGTATGGTGGATCACAAAGCGCACGTCTGGTTTGTC 3777 Query 118271 GATGCCCATCCCGAACGCTATCGT 118294 || || | ||| ||||||||||| Sbjct 3778 AATACCGAGCCCAAACGCTATCGT 3801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381758776292016