Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Porphyridium_20purpureum_20[genbank_20GCA_5F000397085.1_202013-05- 16] 3,014 sequences; 19,451,899 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1055 392 4e-104 seq156 156 5e-33 seq181 118 1e-21 seq225 114 2e-20 seq1059 87.8 2e-12 seq189 87.8 2e-12 >seq1055 Length=10011 Score = 392 bits (434), Expect = 4e-104 Identities = 1074/1624 (66%), Gaps = 67/1624 (4%) Strand=Plus/Plus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 ||||| || | || ||||| || ||||| ||||||||||| || || | || ||||| Sbjct 5699 TCATCCTCCGCCTTGTACTTCTCGGCATCCTGGACCATCTTCTCGATCTGGTCCTTCGAC 5758 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTT-TCGGATTTACCCGAGGCCTTATCTTC 6687 | | ||||| || ||||| || || ||||| || ||| || | | ||| || || Sbjct 5759 AGGCGACCCTTGTCGTTCGTGATTGTGATCTTGCTCTTGTTT-CCAGTCGACTTGTCCTC 5817 Query 6688 AGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGT 6747 ||| || || || ||||| || ||||| ||||| || | || | || || || Sbjct 5818 GGCAGACACGTTTAAGATACCGTTAGCATCGACATCAAAGGTCACCTCGATCTGCGGAAC 5877 Query 6748 ACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGT 6807 ||| | || || | ||||||||| | | ||||| | || || || |||| ||| | Sbjct 5878 ACCGCGGGGCGCCGGTGGAATACCAGACAGCTCAAACTTGCCGAGCAAGTTGTTGTCCTT 5937 Query 6808 CGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGC 6867 | | ||||||||||||| |||| | ||| ||| | || || || || Sbjct 5938 GGTGCGCGCACGTTCACCTTCAAAGACCTGAATAAGCACACCTGGCTGGTTGTCAGCGTA 5997 Query 6868 CGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGT 6927 || |||||||| || | ||||| | || |||||||| || | | || | || || Sbjct 5998 TGTCGAGAAGATCTGCTGCTTCTTGGTGGGGATCGTCGTGTTGCGCTTGATCAGCGTCGT 6057 Query 6928 CATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAG 6987 ||| | |||||| || || || || || ||||| || ||||| || | || || || Sbjct 6058 CATCACACCACCAGCGGTCTCCAGACCCAGCGACAGTGGGGTCACATCGAGCAGCAAAAG 6117 Query 6988 -------GTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCG 7040 |||||| || || || ||||| || | |||||||| || |||| | Sbjct 6118 ATCCTGCGTCTTGGAC-GAG--GTA----TCACCTGTCAGAATGGCGGCCTGCACCGCAG 6170 Query 7041 CCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAAT 7100 | ||||| || || |||||||| ||||| || || || |||||| || ||||| || Sbjct 6171 CACCGTAGGCAACGGCCTCATCTGGGTTGATGGTCTTGCACAGTTCCTTGCCGTTGAAGA 6230 Query 7101 AATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTT 7160 | ||| | || || || | || || | ||| || || || || |||| ||||| | Sbjct 6231 AGTCCTGCAGCAGCTGCTGCACCTTTGGCACTCGCGTAGAGCCGCCCACCAGCACGATCT 6290 Query 7161 CATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATAC 7220 | | || | ||| || | ||| | || || | || || || |||| || Sbjct 6291 CGTCGACCTCCGACTTGCTCACCTTCGCCTCCTTCAGCACATGCTCTACGGGCTCCA-AC 6349 Query 7221 ATTTA-CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 | ||||||| |||||| ||||| |||||||| || || || ||||| | || Sbjct 6350 GTGCCGCGGAACAGGTCCATGCACAGCTCCTCAAACTTGGCGCGCGTGATGGACGAGTAA 6409 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 || ||||| |||||||| | || ||||| ||||| | ||| || | | || || || Sbjct 6410 AAGTCAACACCGTCGTACAGCGCGTCAATCTCAATCGATGTCTGCGTGGCGGATGACAAT 6469 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGG---GTTA--- 7393 || | |||||||||||| || ||||| || | ||| || | ||| |||| ||| Sbjct 6470 GTCCTCTTTGCGCGCTCGCAAGCCGTGCGCAGACGGCGCATGGCGCGCGCCGAGTTCGGG 6529 Query 7394 -CC--GGAAATATCTTTCTTATGTTTACGTTTAAACTCTT---CAGAGAAGTGTCGAAGG 7447 || || | ||| ||||| | || || || || |||| || |||||| || | Sbjct 6530 CCCTGGGTGAGATCCTTCTTGTTCTTGCGCTTGAATTCTTGCACAAAGAAGT-TCACCAG 6588 Query 7448 AGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCA 7507 | | | || || || |||||||||||||| || || || ||||| || ||||| ||| Sbjct 6589 ACGGTTG--TCAAAGTCCTCACCACCCAAGTGCGTGTCACCAGCGGTGGCCTTGACCTCA 6646 Query 7508 AAGATACCTC---CTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCA 7564 |||| || | |||||| | | | || ||||| || || ||||| ||||| || Sbjct 6647 AAGACGCCCGTGTCGTCAATGCTCAGAAGAGACACATCGAATGTTCCACCTCCCAGATCG 6706 Query 7565 AAAATGAGTACGTTCGTATCGTCGT------------CTTTGTTCTTATCGAGACCGTAC 7612 ||||||| || || | ||| || ||| ||| | || | ||||| Sbjct 6707 TAAATGAGCACCATCTTCTCGGAGTGGGAGCCGCTTGCTTCCTTCCTGTCCAACCCGTAG 6766 Query 7613 GCGATAGCCGCCGCCGTTGGTTCATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGT 7671 || || || ||||||||||| || ||||| || || || ||| ||||| |||||||| Sbjct 6767 GCAATCGCAGCCGCCGTTGGCTCGTTAATGATTCGCAACACA-TTCAGACCAGCAATCTG 6825 Query 7672 TGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGAC 7731 | ||||| || || || | || ||||| ||||| || || || || || || || Sbjct 6826 ACCGGCATCCTTGGTGGCCAGACGCTGCGAGTCGTTGAAACGCGCAGGTACGGTCACAAC 6885 Query 7732 CGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAAC 7791 ||||| | | || | ||| | || || | || | ||| || ||||| || || || Sbjct 6886 CGCGTTCTTCACCTCCTTGGCAAGGTATGCCTCTGAGATTTCCTTCATCTTACCCAGCAC 6945 Query 7792 CATCGATGAAATCTCTTCAGCCGCAAACTGT-TTCGTTTCACCGTTAAAATCAACTTCAA 7850 ||| | || || || || | | || ||| || || || || || | | || |||| Sbjct 6946 CATGGCCGAGATTTCCTCTGGCATGAA-TGTCTTGGTCTCGCCCTTGTACTTGACCTCAA 7004 Query 7851 TCATGGGTTTAT---CCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGT 7907 || |||| || | || | || || | ||||| ||| | | || | || Sbjct 7005 TCTTGGGCTTGTTGTCCTCTGCGCCC---ACCACCTTGAACGGGAAGTGCTTGAGGTCCG 7061 Query 7908 CTTGGACCTGTTGGTCCGA---AAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTG 7964 | || || | || ||| ||| || || | |||||||| ||||| || | Sbjct 7062 CCTGCACG-GACGG--CGAGTCAAAGCGCAGACCAATCATTCGCTTTGCGTCAAACACCG 7118 Query 7965 TGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTAT 8024 |||| | |||||||| || |||||||| ||||| || ||||| ||||| || | | Sbjct 7119 TGTTGTGCGGGTTCATCGCCACCTGGTTCTTTGCCGCATCGCCGATGAGACGCTCCGTGT 7178 Query 8025 TTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTT 8084 | || ||||| |||||||| || || |||||||| ||||||||||||||||| || | Sbjct 7179 CT---GTGAACGCCACGTACGACGGCGTGGTTCGATTTCCTTGGTCGTTCGCAATGATCT 7235 Query 8085 CTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGA 8144 | ||||| || || ||||| ||||| |||||||| ||||| || || ||||||||||| | Sbjct 7236 CGACGCGATCATTCTGCCACACGCCCACGCACGAGTACGTGGTGCCCAAATCAATACCCA 7295 Query 8145 TTGC 8148 ||| Sbjct 7296 CTGC 7299 >seq156 Length=39383 Score = 156 bits (172), Expect = 5e-33 Identities = 418/624 (67%), Gaps = 24/624 (4%) Strand=Plus/Plus Query 7531 CAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTC 7590 || ||| || || ||||| || || |||| || || | || | ||| | ||| || | Sbjct 2861 CAGCGATACGTCGAACGTTCCTCCGCCCAAATCGAAGACCAGAATATTCTTCTCGGCGCC 2920 Query 7591 TTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACG-AA 7649 || || || ||||||||||||||||| || || || || || ||||| || || | Sbjct 2921 CTT---CTCGTCAAGACCGTACGCGATAGCTGCGGCGGTGGGCTCGTTAATGATGCGCAT 2977 Query 7650 GACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAA 7709 ||| | | |||||||| || | || || || ||||| || || || | |||||| | Sbjct 2978 GACCG-TGAGGCCAGCGATCACGCCAGCGTCCTTGGTCGCCTGGCGCTGAGCATCGTTGA 3036 Query 7710 AGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGA 7769 |||| || || ||||| || || |||| |||||| |||| || || ||| || || | Sbjct 3037 AGTATGCTGGCACCGTCACCACGGCGTGCGTGACCTTCTCTCCCAGGTACTCCTCAGCAA 3096 Query 7770 TATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTT 7829 | ||||| || ||| ||||| | ||| || ||||| | || || || || | Sbjct 3097 TCAGCTTCATCTTTCCAAGCACCATGGCTGAGATTTCTTCTGGCGAGAAGGTCTTGGTCT 3156 Query 7830 CAC---CGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGG--GATAACCTT 7884 | | | || | || || ||| || || |||| || || || | | Sbjct 3157 CGCCTTCCTTGATGTCCACCGAAATGTACGGCTT-CCCGC----CCTGGTTGACGATAGT 3211 Query 7885 ATACGAC-CAATCTTTCATATCGTCTTGGACCTGTTG-GTCCGAAAACTTTCTTCCGATA 7942 |||| | | |||| | ||| || | | || | |||| |||||| | |||||| Sbjct 3212 GTACGGCAGCAGCTTT-TTGTCGCGCTGCA-CGGTCGTATCCGTAAACTTGCGTCCGATG 3269 Query 7943 AGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCG 8002 || | ||| ||||||| || ||||||| |||||||| || | |||||||| || ||| Sbjct 3270 AGCCTCTTCACATCAAAGACCGTGTTTTGCGGGTTCATTGCGGCCTGGTTCTTGGCGGCG 3329 Query 8003 TCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTC 8062 || || || ||||| || | | ||| ||||| |||||||| || || | || ||| Sbjct 3330 TCACCAATCAGACGCTC---CTCTGGCGTGAACGCCACGTACGACGGCGTGATGCGGTTC 3386 Query 8063 CCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCA-GACGCCGACGCACGAATA 8121 || ||||| || || || ||||| || | ||| || || ||| || |||||||| || Sbjct 3387 CCCTGGTCATTTGCGATGATTTCCAC-CTGTCCATTCCTCATGACTCCCACGCACGAGTA 3445 Query 8122 CGTTGTTCCTAAATCAATACCGAT 8145 || || || | |||||| || || Sbjct 3446 TGTGGTGCCCAGATCAATTCCAAT 3469 >seq181 Length=69431 Score = 118 bits (130), Expect = 1e-21 Identities = 316/477 (66%), Gaps = 6/477 (1%) Strand=Plus/Plus Query 11208 TTTATCTTTGGCGTGTACTTTGAGTATTTCTTCACGTCCGTGAACATCAGGTAAAGAAAC 11267 ||||| || | || ||||| | |||||| | ||| | | ||||| | | ||| Sbjct 14107 TTTATTATTTGAATGAACTTTCAAAATTTCTAATCTTCCTTTACAGTCAGGAACATCAAC 14166 Query 11268 TTGTATTTTACGATCAAATCTACCGGGGCGTAATAACGCATCGTCGAGTATATCGATACG 11327 ||||| | ||| |||||||| || | || ||| || || | ||||| | Sbjct 14167 AGTTATTTGTCTATCGAATCTACCTGGCCTTAGTAAAGCGGAATCTAAAATATCTGCCCT 14226 Query 11328 GTTTGTTGCACCTATAACAACAATTTCAGTTTCATTCTCGAAACCATCCATTTCTGTTAA 11387 || || || | ||||||| || |||| | ||| || |||||||||||||| || Sbjct 14227 ATTAGTCGCTGCAATAACAATAACACCAGTATTTCCCTCAAATCCATCCATTTCTGTCAA 14286 Query 11388 TAATTGGTTAATTGTTTGTTCACGCTCATCGTTTGCCGCAAACCCATTCAT--ACTTCTT 11445 | ||| || | ||||| || | |||||| || |||| | || || | | || | | Sbjct 14287 CATTTGATTCAAAGTTTGCTCTCTCTCATCATTA-CCGCCA-CCTATACCTGTACCACGT 14344 Query 11446 TTCTTACCAATCGCATCAATTTCATCTATAAAGATAATACACGGTTGATTTTCACGTGCC 11505 | |||| |||||||||||||| ||||| | ||| || ||| ||| | ||| Sbjct 14345 TGGCGCCCAACAGCATCAATTTCATCAATAAATACAATGCAAGGTGCATTAGCTTTTGCT 14404 Query 11506 AATTCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACGAT 11565 | ||||| |||||| ||||| || |||||||| |||||||||||||| || Sbjct 14405 TGCTTAAATAAATCACGTACTCTAGAAGCACCTACGCCAACAAACATTTCAACAAATTCA 14464 Query 11566 GACCCCG-AACACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTAAAAG 11624 || || | |||||| || ||||||||| | || || ||||| || || || | Sbjct 14465 GAACCTGAAACACT-AAAAAAAGGAACACCGGCCTCCCCTGCTATGGCTTTCGCCAATAA 14523 Query 11625 TGTTTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAGCACC 11681 ||||||||||| ||||| || ||||||| | || | |||| | | ||||| Sbjct 14524 AGTTTTACCTGTTCCTGGAGGCCCAACTAATAATACTCCTTTAGGTACTGTTGCACC 14580 >seq225 Length=37100 Score = 114 bits (126), Expect = 2e-20 Identities = 226/331 (68%), Gaps = 14/331 (4%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || || || ||||| || || || || ||||| ||||||||||| | || Sbjct 35250 TCAAAGTCCTCTCCGCCCAAATGGGTGTCACCGTTGGTCGACTTGACTTCAAACACTCCG 35191 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAAT---GAGT 7573 || ||| | | | || |||||||| ||||| ||||||||||| | | || Sbjct 35190 CCAGAAATCTCGAGAATAGACACATCAAAGGTACCGCCACCCAGGTCGTACACCGCGATG 35131 Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 || ||| ||||| || ||| | ||||||||||| |||||||| || || Sbjct 35130 ACCTTCC------CGTCTGC---CTCATCCATACCGTACGCGAGCGCCGCCGCGGTGGGC 35080 Query 7634 TCATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTG 7692 || || |||||||| | |||| || || || ||||| | | |||||||| || || || Sbjct 35079 TCGTTGATAATACGCATGACA-TTGAGACCGGCAATCTGTCCAGCATCTTTGGTGGCCTG 35021 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752 ||| || | ||| || || || ||||| || || || ||||||| || || |||| || Sbjct 35020 TCGCTGAGCATCATTGAAATACGCCGGAACGGTCACAACCGCGTTGGTTACGTTCTGGCC 34961 Query 7753 GAGATACGATTCCGCGATATCTTTCATTTTG 7783 ||| | ||||| | | ||||||||| Sbjct 34960 CAGAAAGTCCTCCGCCGTCTTCTTCATTTTG 34930 >seq1059 Length=17963 Score = 87.8 bits (96), Expect = 2e-12 Identities = 213/320 (67%), Gaps = 6/320 (2%) Strand=Plus/Plus Query 104467 CTTTGGTCTATATACACACCTCTATCCGCCGCCATATCGATGATTGTTTTTTGACTCATT 104526 |||||||| || || | || | || |||||||| | | | ||| || || ||| Sbjct 15050 CTTTGGTCGATGAACGCGCCACGGTCGGCCGCCATCTTCAACAATGTCTTCTGCGAAATT 15109 Query 104527 TCCCATACGGTTTTATACAATTCCTTAAGATCATCGGGTATATCAATAATGTTTTGAACA 104586 ||||| |||||||| || | ||| || ||| | || || || | | | |||| || Sbjct 15110 TCCCAAACGGTTTTGTAAAGTTCACGCAGCTCAGCCGGAATCTCCGTCAGGCTTTGTACT 15169 Query 104587 GACCCATT---TGCCTTCACCATAAGATCTTTCATTTCCTTCGACCAGAGTCCACGTTCT 104643 || ||||| ||| | | | | | |||| | | | || ||| || ||| | Sbjct 15170 GAACCATTGTTTGCGATGATCTT--GTTCTT-CGTCGCATTGTTCCAAAGGCCAAGACTC 15226 Query 104644 TTCAAATCGTTTACTAAATGTTTGTTTACGACGACAAATTCACCCGCGAGTGTTCGTCTC 104703 | || ||| | | ||||| ||||| || ||| | || || |||||||| || | | Sbjct 15227 TGCAGATCACTCAGCAAATGCTTGTTAACAACGGCGAACTCGCCCGCGAGAACGCGGCGC 15286 Query 104704 AAATAGATATTGGTCGTATACGGTTCGAAACACTCGTTGTTCCCTAAAATCTGGGATGTG 104763 ||||| || | ||| |||||||| || ||||||||||| || | |||||| || ||| Sbjct 15287 GTGTAGATGTTTGACGTGTACGGTTCAAAGCACTCGTTGTTACCCAGAATCTGCGACGTG 15346 Query 104764 GATGCGGTAGGCATAGGTGC 104783 || || || ||||| || || Sbjct 15347 GAAGCAGTCGGCATGGGCGC 15366 >seq189 Length=13781 Score = 87.8 bits (96), Expect = 2e-12 Identities = 188/273 (69%), Gaps = 10/273 (4%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || ||||| || ||||||||||| ||||| || | || | | || || || | || Sbjct 11774 TCAAAATCATCTCCACCCAAGTGGGTATCTCCTGATGTAGATAAAACCTCGAATACGCCA 11715 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || ||| | ||| || || || ||||| || || ||||| | ||||||| |||| Sbjct 11714 TCTCCAACTTCTAATAATGATACGTCAAATGTTCCTCCACCTAAATCAAAAACAAGTA-- 11657 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | || || | | ||| || ||||| || || || || | | || || || || ||| Sbjct 11656 -TTGTTTCAT--TATTT-TTTTTATCAAGTCCATATGCTAGTGAAGCAGCTGTAGGCTCA 11601 Query 7637 TTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGTC 7694 || | || ||||| ||| | | |||||| || ||||| |||| || || | ||| | Sbjct 11600 TTGACTATGCGAAGTACA-TCTAAGCCAGCTAT-CTTGCCGGCATTCTTAGTAGATTGCC 11543 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTA 7727 ||| ||||||||||| ||||| || || |||| Sbjct 11542 TTTGAGAATCGTTAAAATAGGCTGGAACTGTTA 11510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635108871371760