Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Porphyridium_20purpureum_20[genbank_20GCA_5F000397085.1_202013-05- 16] 3,014 sequences; 19,451,899 total letters Query= NC_019405.1 Length=215710 Score E Sequences producing significant alignments: (Bits) Value seq1962 183 4e-41 >seq1962 Length=79148 Score = 183 bits (202), Expect = 4e-41 Identities = 499/751 (66%), Gaps = 16/751 (2%) Strand=Plus/Plus Query 136645 TAGCCCTTCACGCAGAGGACTTGCTTGAGGGTGTGGACGATGTCCACGAGGTCCTTCTGG 136704 || ||||| ||||| || | |||||||| |||| | | ||||| |||||||| | ||| Sbjct 51199 TACCCCTTGACGCACAGAATCTGCTTGAGCGTGTAGGCAATGTCGACGAGGTCTTCCTGC 51258 Query 136705 GCCTCCATGACCGCGTCGATGTCCTTGTAGGCCATCGGGATTTCGTCGATCACGCCAGCG 136764 || ||||||| || ||| ||| || ||| ||| | || || | ||| || Sbjct 51259 GCACCCATGACTAGTTCAATGGGCTTATATGCCGCCGGCGTCTCATCAACCACACCCAAA 51318 Query 136765 TCCTTGCGGCACTCCACGCCCTCGGTGGCCTTGATCTGGTCCTCC-AGGGTGAAGGTCGC 136823 ||||| || ||||| ||||||| |||||| | || | || | | ||||| || Sbjct 51319 TCCTTTCGACACTCGACGCCCTGTGTGGCCA-GCTCGTGCACTGCGACTGTGAATTTCTT 51377 Query 136824 CTTGGCCTGGGTCCGCGACATCGTCCGGCCCGCGCCGTGCGAGCACGAGCAGAACGAGTC 136883 |||||| || || |||| |||||| |||||||| ||| | | |||| | Sbjct 51378 CTTGGCAGCCGTGCGAGACAAGAGCCGGCCGGCGCCGTGACTGCAAGTGTTATACGAATG 51437 Query 136884 CGCATTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGATCCC 136943 | |||||||| |||||||| || || |||||||||||||||||| || |||||||| Sbjct 51438 TGGGTTGCCCTTTCCGCGCACAATAAAGCTCTTGGCCCCCATCGAGCCCGGAATGATCCC 51497 Query 136944 GAAC--TGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGACCCACTCGTCG 137001 | || | | | ||||||| || || ||||| | || | | || | ||| || Sbjct 51498 GTACATTCCTTCATCTGCGC--GTACGGCCCCCTTTCTCGTGATCATGAGCTCCTCTCCG 51555 Query 137002 AAGTGGAATTCCTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTTCCTTGTCCGTCTTG 137061 || ||| || | || ||||| |||||||| | || || || ||| |||| Sbjct 51556 AAATGGTTCTCGATAGACACATAGTTATGGTGGCACTCAACTGCAAACTGGTCGTCCTTG 51615 Query 137062 AACGGCGGCAGGC---CCGACGCCCGCATGGCCTCCAGGACCCGGACCATCATCATCTCG 137118 || ||| || | | || ||||| || |||| ||| | ||||||| | || Sbjct 51616 AAGTCCGGTAGACACTTCAGCGAGCGCATTGCGCCCAGCACCTGCGCCATCATGAGCTTA 51675 Query 137119 CGGTTGATCCGCGCGAAGTCCTGGCCCCAGGCGACGGCTTCCACGTAGTCGTGGAACTCC 137178 || || | ||||| || | ||| |||| ||||| | || |||||||| ||| | | Sbjct 51676 CGATTTAAGCGCGCAAATTGCTGCGCCCACTGTACGGCATGCATGTAGTCGTCGAAATGC 51735 Query 137179 GGC-TCGCCTTCGCAGAGCCAAGCAAGGTCCTTGTCCAGCGGCTTGCGCCCGTCACGACG 137237 || || ||||| || | || || |||| ||| || | || ||| || | || Sbjct 51736 TGCGTCCCCTTCTTCAAG-TACGCCAGATCCTGATCCGGCAGGTTTCGCAGGTGCTGTCG 51794 Query 137238 CAGCATCATCTCCTTGGCCTTCTCGATGAAGATGCG-GCCGATGGTGTTGCCGACGCCGC 137296 || ||| | ||| || ||| || ||| | || ||||| |||||| || || | Sbjct 51795 CA-TATC--TTTCTTCGCAAGCTCAATAAAG-TACGTACCGATTCGGTTGCCCACCCCCC 51850 Query 137297 GCGAGCCCGAGTGGAGCATCACCCAGACGCGCTGGTCCTCGTCGAGGCAGACCTCGATGA 137356 ||||| ||||| ||||||||||| || | |||| | || || ||||| || || | Sbjct 51851 TTGAGCCGGAGTGAAGCATCACCCAAACATTATCGTCCCCATCTAGACAGACTTCAATAA 51910 Query 137357 AGTGGTTGCCGCCGCCCAGGGTGCCCAGTTG 137387 |||||||||| || || |||||||| || Sbjct 51911 AGTGGTTGCCCGTCCCAAGCGTGCCCAGATG 51941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 690117998824800