Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Porphyridium_20purpureum_20[genbank_20GCA_5F000397085.1_202013-05- 16] 3,014 sequences; 19,451,899 total letters Query= NC_019407.1 Length=218929 Score E Sequences producing significant alignments: (Bits) Value seq1962 187 3e-42 >seq1962 Length=79148 Score = 187 bits (206), Expect = 3e-42 Identities = 501/752 (67%), Gaps = 18/752 (2%) Strand=Plus/Plus Query 135405 TAGCCCTTCACGCAGAGGACTTGCTTGAGGGTGTGGACGATGTCCACGAGGTCCTTCTGG 135464 || ||||| ||||| || | |||||||| |||| | | ||||| |||||||| | ||| Sbjct 51199 TACCCCTTGACGCACAGAATCTGCTTGAGCGTGTAGGCAATGTCGACGAGGTCTTCCTGC 51258 Query 135465 GCCTCCATGACCGCGTCGATGTCCTTGTAGGCCATCGGGATTTCGTCGATCACGCCAGCG 135524 || ||||||| || ||| ||| || ||| ||| | || || | ||| || Sbjct 51259 GCACCCATGACTAGTTCAATGGGCTTATATGCCGCCGGCGTCTCATCAACCACACCCAAA 51318 Query 135525 TCCTTACGGCACTCCACGCCCTCGGTGGCCTTGATCTGGTCCTCC-AGGGTGAAGGTCGC 135583 ||||| || ||||| ||||||| |||||| | || | || | | ||||| || Sbjct 51319 TCCTTTCGACACTCGACGCCCTGTGTGGCCA-GCTCGTGCACTGCGACTGTGAATTTCTT 51377 Query 135584 CTTGGCCTGGGTCCGCGACATCGTCCGGCCCGCGCCGTGCGAGCACGAGCAGAACGAGTC 135643 |||||| || || |||| |||||| |||||||| ||| | | |||| | Sbjct 51378 CTTGGCAGCCGTGCGAGACAAGAGCCGGCCGGCGCCGTGACTGCAAGTGTTATACGAATG 51437 Query 135644 CGCATTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGATCCC 135703 | |||||||| |||||||| || || |||||||||||||||||| || |||||||| Sbjct 51438 TGGGTTGCCCTTTCCGCGCACAATAAAGCTCTTGGCCCCCATCGAGCCCGGAATGATCCC 51497 Query 135704 GAAC--TGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGACCCACTCGTCG 135761 | || | | | ||||||| || || ||||| | || | | || | ||| || Sbjct 51498 GTACATTCCTTCATCTGCGC--GTACGGCCCCCTTTCTCGTGATCATGAGCTCCTCTCCG 51555 Query 135762 AAGTGGAATTCCTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTTCCTTGTCCGTCTTG 135821 || ||| || | || ||||| |||||||| | || || || ||| |||| Sbjct 51556 AAATGGTTCTCGATAGACACATAGTTATGGTGGCACTCAACTGCAAACTGGTCGTCCTTG 51615 Query 135822 AACGGCGGCAGGC---CCGACGCCCGCATGGCCTCCAGGACCCGGACCATCATCATCTCG 135878 || ||| || | | || ||||| || |||| ||| | ||||||| | || Sbjct 51616 AAGTCCGGTAGACACTTCAGCGAGCGCATTGCGCCCAGCACCTGCGCCATCATGAGCTTA 51675 Query 135879 CGGTTGATCCGCGCGAAGTCCTGGCCCCAGGCGACGGCTTCCACGTAGTCGTGGAACT-C 135937 || || | ||||| || | ||| |||| ||||| | || |||||||| ||| | | Sbjct 51676 CGATTTAAGCGCGCAAATTGCTGCGCCCACTGTACGGCATGCATGTAGTCGTCGAAATGC 51735 Query 135938 CGGTTCGCCTTCGCAGAGCCAAGCAAGGTCCTTGTCCAGCGGCTTGCGCCCGTCACGCCG 135997 | || ||||| || | || || |||| ||| || | || ||| || || | Sbjct 51736 TGCGTCCCCTTCTTCAAG-TACGCCAGATCCTGATCCGGCAGGTTTCGCAGGT---GCTG 51791 Query 135998 CAGCATCATC-TCCTTGGCCTTCTCGATGAAGATACG-GCCGATGGTGTTGCCGACGCCG 136055 |||| ||| | ||| || ||| || ||| |||| ||||| |||||| || || Sbjct 51792 TCGCAT-ATCTTTCTTCGCAAGCTCAATAAAG-TACGTACCGATTCGGTTGCCCACCCCC 51849 Query 136056 CGCGAGCCCGAGTGGAGCATCACCCAGACGCGCTGGTCCTCGTCGAGGCAGACCTCGATG 136115 | ||||| ||||| ||||||||||| || | |||| | || || ||||| || || Sbjct 51850 CTTGAGCCGGAGTGAAGCATCACCCAAACATTATCGTCCCCATCTAGACAGACTTCAATA 51909 Query 136116 AAGTGGTTGCCGCCGCCCAGGGTGCCCAGTTG 136147 ||||||||||| || || |||||||| || Sbjct 51910 AAGTGGTTGCCCGTCCCAAGCGTGCCCAGATG 51941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 700418410742160