Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Porphyridium_20purpureum_20[genbank_20GCA_5F000397085.1_202013-05- 16] 3,014 sequences; 19,451,899 total letters Query= NC_019410.1 Length=221828 Score E Sequences producing significant alignments: (Bits) Value seq1962 134 2e-26 >seq1962 Length=79148 Score = 134 bits (148), Expect = 2e-26 Identities = 484/751 (64%), Gaps = 16/751 (2%) Strand=Plus/Plus Query 137204 TAGCCCTTCACGCAGAGGACTTGCTTGAGGGTGTGGACGATGTCCACGAGGTCCTTCTGG 137263 || ||||| ||||| || | |||||||| |||| | | ||||| |||||||| | ||| Sbjct 51199 TACCCCTTGACGCACAGAATCTGCTTGAGCGTGTAGGCAATGTCGACGAGGTCTTCCTGC 51258 Query 137264 GCCTCCATGACCGCGTCGNNNNNNNNNNNNNNNNNNNNNATTTCGTCGATCACGCCGGCG 137323 || ||||||| || | || || | ||| || Sbjct 51259 GCACCCATGACTAGTTCAATGGGCTTATATGCCGCCGGCGTCTCATCAACCACACCCAAA 51318 Query 137324 TCCTTGCGGCACTCCACGCCCTCGGTGGCCTTGATCTGGTCCTCC-AGAGTGAAGGTCGC 137382 ||||| || ||||| ||||||| |||||| | || | || | | ||||| || Sbjct 51319 TCCTTTCGACACTCGACGCCCTGTGTGGCCA-GCTCGTGCACTGCGACTGTGAATTTCTT 51377 Query 137383 CTTGGCCTGGGTCCGCGACATCGTCCGGCCCGCGCCGTGCGAGCACGAGCAGAACGAGTC 137442 |||||| || || |||| |||||| |||||||| ||| | | |||| | Sbjct 51378 CTTGGCAGCCGTGCGAGACAAGAGCCGGCCGGCGCCGTGACTGCAAGTGTTATACGAATG 51437 Query 137443 CGCATTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGATCCC 137502 | |||||||| |||||||| || || |||||||||||||||||| || |||||||| Sbjct 51438 TGGGTTGCCCTTTCCGCGCACAATAAAGCTCTTGGCCCCCATCGAGCCCGGAATGATCCC 51497 Query 137503 GAAC--TGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGACCCACTCGTCG 137560 | || | | | ||||||| || || ||||| | || | | || | ||| || Sbjct 51498 GTACATTCCTTCATCTGCGC--GTACGGCCCCCTTTCTCGTGATCATGAGCTCCTCTCCG 51555 Query 137561 AAGTGGAATTCCTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTTCCTTGTCCGTCTTG 137620 || ||| || | || ||||| |||||||| | || || || ||| |||| Sbjct 51556 AAATGGTTCTCGATAGACACATAGTTATGGTGGCACTCAACTGCAAACTGGTCGTCCTTG 51615 Query 137621 AACGGCGGCAGGC---CCGACGCCCGCATGGCCTCCAGGACCCGGACCATCATCATCTCG 137677 || ||| || | | || ||||| || |||| ||| | ||||||| | || Sbjct 51616 AAGTCCGGTAGACACTTCAGCGAGCGCATTGCGCCCAGCACCTGCGCCATCATGAGCTTA 51675 Query 137678 CGGTTGATCCGCGCGAAGTCCTGGCCCCAGGCGACGGCTTCCACGTAGTCGTGGAACTCC 137737 || || | ||||| || | ||| |||| ||||| | || |||||||| ||| | | Sbjct 51676 CGATTTAAGCGCGCAAATTGCTGCGCCCACTGTACGGCATGCATGTAGTCGTCGAAATGC 51735 Query 137738 GGC-TCGCCTTCGCAGAGCCAAGCAAGGTCCTTGTCCAGCGGCTTGCGCCCGTCACGGCG 137796 || || ||||| || | || || |||| ||| || | || ||| || | || Sbjct 51736 TGCGTCCCCTTCTTCAAG-TACGCCAGATCCTGATCCGGCAGGTTTCGCAGGTGCTGTCG 51794 Query 137797 CAGCATCATCTCCTTGGCCTTCTCGATGAAGATGCG-GCCGATGGTGTTGCCGACGCCGC 137855 || ||| | ||| || ||| || ||| | || ||||| |||||| || || | Sbjct 51795 CA-TATC--TTTCTTCGCAAGCTCAATAAAG-TACGTACCGATTCGGTTGCCCACCCCCC 51850 Query 137856 GCGAGCCCGAGTGGAGCATCACCCAGACGCGCTGATCCTCGTCGAGGCAGACCTCGATGA 137915 ||||| ||||| ||||||||||| || | ||| | || || ||||| || || | Sbjct 51851 TTGAGCCGGAGTGAAGCATCACCCAAACATTATCGTCCCCATCTAGACAGACTTCAATAA 51910 Query 137916 AGTGGTTGCCGCCGCCCAGGGTGCCCAGTTG 137946 |||||||||| || || |||||||| || Sbjct 51911 AGTGGTTGCCCGTCCCAAGCGTGCCCAGATG 51941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 709694861238720