Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Porphyridium_20purpureum_20[genbank_20GCA_5F000397085.1_202013-05- 16] 3,014 sequences; 19,451,899 total letters Query= NC_019411.1 Length=219216 Score E Sequences producing significant alignments: (Bits) Value seq1962 143 4e-29 >seq1962 Length=79148 Score = 143 bits (158), Expect = 4e-29 Identities = 418/631 (66%), Gaps = 16/631 (3%) Strand=Plus/Plus Query 136088 TCCTTGCGGCACTCCACGCCCTCGGTGGCCTTGATCTGGTCCTCC-AGGGTGAAGGTCGC 136146 ||||| || ||||| ||||||| |||||| | || | || | | ||||| || Sbjct 51319 TCCTTTCGACACTCGACGCCCTGTGTGGCCA-GCTCGTGCACTGCGACTGTGAATTTCTT 51377 Query 136147 CTTGGCCTGGGTCCGCGACATCGTCCGGCCCGCGCCGTGCGAGCACGAGCAGAACGAGTC 136206 |||||| || || |||| |||||| |||||||| ||| | | |||| | Sbjct 51378 CTTGGCAGCCGTGCGAGACAAGAGCCGGCCGGCGCCGTGACTGCAAGTGTTATACGAATG 51437 Query 136207 CGCGTTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGATCCC 136266 | ||||||||| |||||||| || || |||||||||||||||||| || |||||||| Sbjct 51438 TGGGTTGCCCTTTCCGCGCACAATAAAGCTCTTGGCCCCCATCGAGCCCGGAATGATCCC 51497 Query 136267 GAAC--TGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGACCCACTCGTCG 136324 | || | | | ||||||| || || ||||| | || | | || | ||| || Sbjct 51498 GTACATTCCTTCATCTGCGC--GTACGGCCCCCTTTCTCGTGATCATGAGCTCCTCTCCG 51555 Query 136325 AAGTGGAATTCCTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTTCCTTGTCCGTCTTG 136384 || ||| || | || ||||| |||||||| | || || || ||| |||| Sbjct 51556 AAATGGTTCTCGATAGACACATAGTTATGGTGGCACTCAACTGCAAACTGGTCGTCCTTG 51615 Query 136385 AACGGCGGCAGGC---CCGACGCTCGCATGGCCTCCAGGACCCGGACCATCATCATCTCG 136441 || ||| || | | || ||||| || |||| ||| | ||||||| | || Sbjct 51616 AAGTCCGGTAGACACTTCAGCGAGCGCATTGCGCCCAGCACCTGCGCCATCATGAGCTTA 51675 Query 136442 CGGTTGATCCGCGCGAAGTCCTGGCCCCAGGCGACGGCTTCCACGTAGTCGTGGAACTCC 136501 || || | ||||| || | ||| |||| ||||| | || |||||||| ||| | | Sbjct 51676 CGATTTAAGCGCGCAAATTGCTGCGCCCACTGTACGGCATGCATGTAGTCGTCGAAATGC 51735 Query 136502 GGC-TCGCCTTCGCAGAGCCAAGCAAGGTCCTTGTCCAGCGGCTTACGCCCGTCACGGCG 136560 || || ||||| || | || || |||| ||| || | || ||| || | || Sbjct 51736 TGCGTCCCCTTCTTCAAG-TACGCCAGATCCTGATCCGGCAGGTTTCGCAGGTGCTGTCG 51794 Query 136561 CAGCATCATCTCCTTGGCCTTCTCGATGAAGATGCG-GCCGATGGTGTTGCCGACGCCGC 136619 || ||| | ||| || ||| || ||| | || ||||| |||||| || || | Sbjct 51795 CA-TATC--TTTCTTCGCAAGCTCAATAAAG-TACGTACCGATTCGGTTGCCCACCCCCC 51850 Query 136620 GCGAGCCCGAGTGGAGCATCACCCAGACGCGCTGGTCCTCGTCGAGGCAGACCTCGATGA 136679 ||||| ||||| ||||||||||| || | |||| | || || ||||| || || | Sbjct 51851 TTGAGCCGGAGTGAAGCATCACCCAAACATTATCGTCCCCATCTAGACAGACTTCAATAA 51910 Query 136680 AGTGGTTGCCGCCGCCCAGGGTGCCCAGTTG 136710 |||||||||| || || |||||||| || Sbjct 51911 AGTGGTTGCCCGTCCCAAGCGTGCCCAGATG 51941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 701336776141440