Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Porphyridium_20purpureum_20[genbank_20GCA_5F000397085.1_202013-05- 16] 3,014 sequences; 19,451,899 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq250 652 0.0 >seq250 Length=47047 Score = 652 bits (722), Expect = 0.0 Identities = 745/998 (75%), Gaps = 2/998 (0%) Strand=Plus/Plus Query 154991 CTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCGCTG 155050 |||| ||||| | ||| |||||||||| ||||| | ||||| ||| | | | | Sbjct 1262 CTGAAAACCGTTTATATATCGGTTGGTTTGGTGTATTAATGATTCCTACATTATTAACAG 1321 Query 155051 CTGCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTC 155110 || || | ||||| | || ||| ||||||| ||||| || || ||||||||||| | Sbjct 1322 CTACTTCTGTATTCATCATTGCATTCGTTGCTGCTCCTCCAGTTGATATTGATGGTATCC 1381 Query 155111 GTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCC 155170 ||||||| || |||||||||||| | || ||||||||||| ||||||||||||||| | | Sbjct 1382 GTGAACCAGTTGCTGGTTCTTTACTATACGGTAACAACATTATCTCTGGTGCTGTTATTC 1441 Query 155171 CTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATG 155230 | ||||| || |||||| | |||||||| || ||||||||||| || || | || | Sbjct 1442 CAAGTTCTGCTGCTATTGGTATTCACTTCTACCCAATTTGGGAAGCTGCTTCTTTAGACG 1501 Query 155231 AGTGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCA 155290 ||||||| ||||| ||||| | || || | || || ||||| | | || | Sbjct 1502 AGTGGTTATACAACGGTGGGTGCTACCCTCTAATCGTATTACACTTTTTACTAGGTGTTG 1561 Query 155291 CAGCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCT 155350 | ||| |||||| ||||||||||| |||||| | || ||||||||||||||| Sbjct 1562 CTTGCTACATGGGTCGTGAGTGGGAACTTAGCTACCGTTTAGGTATGCGTCCTTGGATCG 1621 Query 155351 GTGTTGCATACTCTGCACCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCG 155410 |||||||| |||||| ||||| | ||||| ||||||||| | | || || | | Sbjct 1622 CTGTTGCATTCTCTGCTCCAGTTGCAGCTGCAACTGCTGTATTCTTGATCTACCCGATTG 1681 Query 155411 GTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGT 155470 ||||||| |||||||||| |||||| | ||||| |||||||| || |||| ||| Sbjct 1682 GTCAAGGCAGCTTCTCTGATGGTATGCCTTTAGGTATTTCTGGTACATTCAACTTCATGA 1741 Query 155471 TCGTGTTCCAAGCAGAACACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAG 155530 | || |||||||| || || || || || |||||||| |||||| | || || || | Sbjct 1742 TTGTATTCCAAGCTGAGCATAACATTCTAATGCACCCATTCCACCAATTAGGTGTTGCTG 1801 Query 155531 GTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAA 155590 |||| || ||||||||||| ||| |||||||||||||||| | || || ||| ||| Sbjct 1802 GTGTATTTGGTGGATCTCTATTCAGTGCTATGCACGGTTCACTAGTAACTTCTAGTTTAA 1861 Query 155591 TCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAG 155650 |||||||||| ||||| | || ||| |||||||||||||||||||| |||||||||| Sbjct 1862 TCCGTGAAACAACTGAAAATGAATCTGCTAACTATGGTTACAAGTTCGGTCAAGAAGAAG 1921 Query 155651 AAACTTATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGCAT 155710 |||||||||||||||||||||| ||||| ||||| |||||| | || ||||| ||||| Sbjct 1922 AAACTTATAACATTGTTGCTGCACATGGTTACTTTGGTCGTTTAATATTCCAATATGCTA 1981 Query 155711 CCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCT 155770 ||||||||||| | |||||||||||| | | | |||||| || || | || | Sbjct 1982 GTTTCAACAACTCTCGTTCACTTCACTTCTTCTTAGGTTTATGGCCAGTTGTAGGTATTT 2041 Query 155771 GGGCAACTGCTATGGGTGTGTCAACGATGGCATTCAACCTTAACGGTTTCAACTTCAACC 155830 || ||| |||| ||| ||||| ||||| || ||| | || |||||||||||||||| Sbjct 2042 GGTTAACATCTATCTCTGTATCAACTATGGCGTTTAACTTAAATGGTTTCAACTTCAACC 2101 Query 155831 AGTCTGTAGTAGAC-GCTAGTGGTAAAGTCATCCCTACATGGGCAGACATTCTTAACCGC 155889 | |||||||| ||| || | ||| || || || ||||| || || ||||||| Sbjct 2102 AATCTGTAGTTGACAGCCA-AGGTCGTGTAATTAACACTTGGGCTGATATCATTAACCGT 2160 Query 155890 GCTGGTCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTT 155949 ||| | ||||||||||| ||||| ||||||||||||||||||||||| | ||| | Sbjct 2161 GCTAACTTAGGTATGGAAGTTATGCATGAGCGTAACGCTCACAACTTCCCATTAGACTTA 2220 Query 155950 GCTGCTGCTGAGTCAGTGCCTGTTGCACTTACTGCACC 155987 || ||| ||| || | ||||||||| | || || || Sbjct 2221 GCGTCTGGTGAATCTCTACCTGTTGCATTAACAGCTCC 2258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584813166333840