Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Porphyridium_20purpureum_20[genbank_20GCA_5F000397085.1_202013-05- 16] 3,014 sequences; 19,451,899 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq970 82.4 6e-11 >seq970 Length=23808 Score = 82.4 bits (90), Expect = 6e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 107640 AAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAA 107699 |||||| || || |||||| | || || |||||| | | |||| |||||| || Sbjct 22648 AAGATTCAAGACAAGGAAGGCATCCCGCCAGACCAGCAGCGCTTGATTTTTGCGGGCAAG 22589 Query 107700 CAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAAAGGAGTCTACGTTGCAC 107759 ||||||||||||| |||| || | ||||| ||||| || |||||||| || |||||| Sbjct 22588 CAGCTGGAGGACGGACGAACACTGTCAGACTATAACATCCAGAAGGAGTCGACCTTGCAC 22529 Query 107760 ATGGTGTTGAGATTGCGAGGGGG 107782 |||| || | |||| || || Sbjct 22528 TTGGTTCTGCGTCTGCGCGGTGG 22506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398862148008646