Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Porphyridium_20purpureum_20[genbank_20GCA_5F000397085.1_202013-05- 16] 3,014 sequences; 19,451,899 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq148 196 6e-45 >seq148 Length=44851 Score = 196 bits (216), Expect = 6e-45 Identities = 464/697 (67%), Gaps = 8/697 (1%) Strand=Plus/Plus Query 146931 GTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCC 146990 ||||||| ||| ||||||||||| |||| |||||||| || ||||| | |||||| Sbjct 22182 GTGGTTGTTGTACACGTGCGCGTCGCCCAACACATGCACAAACTCTCCCGGTTGAAGGCC 22241 Query 146991 GGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCC 147050 | | || ||||||||| ||| ||||||| |||||||| |||||||| || || || Sbjct 22242 GACAATATGCGCCACCATGATGGTCAGCAGCGCATAGCTGGCAATGTTGAAAGGCACACC 22301 Query 147051 CAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGC---CAC 147107 || |||||||| | || | |||||||| ||||||||| ||||| ||| ||| ||| Sbjct 22302 CAAACCCATGTCGCAAGAGCGCTGGTACATCTGGCACGACAGCTCGCCGCTGGCATTCAC 22361 Query 147108 GTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTT 147167 |||||| ||| | ||||||||||| |||| ||||| | || | || || || Sbjct 22362 GTAAAATTGGGCGAACATGTGGCACGGTGGCAAGGCCATTTGCGATAGCGCGGCCGGATT 22421 Query 147168 CCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACCCA 147227 ||| || | |||| || | | | ||||| | | | || || || | Sbjct 22422 CCACGCACTCATGACCATGCGGCGGTCATTCGGGTTTGTGCGCAGCGTATCAATCACACC 22481 Query 147228 CCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGC-AGTCCACGTACCTGGCCC 147286 | |||||| |||||||| || || ||||| | | | || || | ||| | || | Sbjct 22482 CTGCAGCTGATCCACGCCTTGCCCGGCGTAG-TCGGCGTGCTTGTTCGAGTATGTTGCGC 22540 Query 147287 CAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGA 147346 ||||||| | |||||| ||||| || || || ||||||||||| |||| | | | | Sbjct 22541 CAAAGTGGCGCCACTGAAAGCCATAGACCGGACCCAGGTCGCCCGGCTCACGCTCAGTCA 22600 Query 147347 AGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGG 147406 || | | ||||||||| | || |||| ||||||| ||| | || | Sbjct 22601 GACCGAGACTATCCAGAAACTCGCGCGAGCCGTTCCCGTCCCAAATGTGGATACCGCGTG 22660 Query 147407 CGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCC 147466 | | ||| || | ||||||| ||| || | ||||| |||| |||||| || | Sbjct 22661 CCGCGAGTAGGTTGGCGTCCGTGCTGCCGCGCACAAACCACAGCATTTCCTCCGCGACGC 22720 Query 147467 CCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAA---CTGGTCCCTCAGCGAATACC 147523 | | ||| || || | ||| ||||| ||||| ||||| | | | |||||| | | Sbjct 22721 CGCGCCAGAACACGCGCTTTGTGGTGAGCAGCGGGAAAGTGTTATTGCGCAGCGAGAAAC 22780 Query 147524 TCGCCTGGTCCCCAAACACAGACAGCGTGCCCGTGCCCGTCCTGTCCTCCCTGCGCGTCC 147583 | |||| ||| || || || |||| ||||| || || | ||| | | ||| | Sbjct 22781 GCATCTGGCGCCCGAAAACCGAGCGCGTACCCGTACCAGTGCGGTCTGACTTTTGCGCGC 22840 Query 147584 CGTTCTCCAAAATCTCCCTGACGGTGTTGAGGTACTG 147620 ||| ||| | ||||| | ||| | |||||||| Sbjct 22841 CGTACTCGATGATCTCGCGCACGAGCTCCAGGTACTG 22877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583466017089600