Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq15664 127 1e-24 >seq15664 Length=8101 Score = 127 bits (140), Expect = 1e-24 Identities = 174/241 (72%), Gaps = 8/241 (3%) Strand=Plus/Minus Query 101687 TCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACT 101746 || ||||| | || ||||| ||||| |||||| || || |||||||| ||| |||| Sbjct 6692 TCGATGTGGTTTAAATAGACGTGAGTATCTCCCATGACGTGAATAAACTCACCA--CACT 6635 Query 101747 AGATTAGTGACA----TGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAA 101802 | || ||| || ||||| | | || | | || ||| || ||||| || || Sbjct 6634 TTA--AGGAACACACTTGTGCAATTAAACGTGTGAGCAAAGCATAACTGGCAATATTGAA 6577 Query 101803 TGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATC 101862 ||||| || | |||||||| ||||||||||| |||| |||||| || |||| |||||| Sbjct 6576 CGGCACACCGAGGCCCATATCGGCTGATCTTTGGTACATTTGACAAGAGAGCTCTCCATC 6517 Query 101863 ACAGACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGA 101922 ||||||||||| | || | ||||||||| ||||| |||||||| | |||||| Sbjct 6516 CACCACATAAAATTGGCAAAACATATGACAAGGGGGCAAAGCCATTTTATCCAAGTCTGA 6457 Query 101923 A 101923 | Sbjct 6456 A 6456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361027500726059