Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq15664 116 3e-21 >seq15664 Length=8101 Score = 116 bits (128), Expect = 3e-21 Identities = 160/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 97051 TCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACT 97110 || ||||| || | ||| | ||||| |||||| | ||||||||| || ||| | Sbjct 6692 TCGATGTGGTTTAAATAGACGTGAGTATCTCCCATGACGTGAATAAACTCACCACACTTT 6633 Query 97111 AAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGC 97170 || | || || || || | || || | | || ||| || ||||| || || ||| Sbjct 6632 AAGGAACACACTTGTGCAATTAAACGTGTGAGCAAAGCATAACTGGCAATATTGAACGGC 6573 Query 97171 ACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACAC 97230 || || || |||||||| ||||||||||| || | ||||| || |||| |||||| | Sbjct 6572 ACACCGAGGCCCATATCGGCTGATCTTTGGTACATTTGACAAGAGAGCTCTCCATCCACC 6513 Query 97231 ACATAAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTT 97274 |||||||| || | || | |||||| |||||||| |||||||| Sbjct 6512 ACATAAAATTGGCAAAACATATGACAAGGGGGCAAAGCCATTTT 6469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346569259318130