Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq15664 123 2e-23 >seq15664 Length=8101 Score = 123 bits (136), Expect = 2e-23 Identities = 119/153 (78%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 20400 AATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTC 20459 |||||||||||| || ||||||||| | ||||||||||| || | || || | || Sbjct 6471 AATGGCTTTGCCCCCTTGTCATATGTTTTGCCAATTTTATGTGGTGGATGGAGAGCTCTC 6530 Query 20460 GTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAG 20519 ||||||||||| ||| |||| || |||||||| || ||||| || ||||||||||| || Sbjct 6531 TTGTCAAATGTACCAAAGATCAGCCGATATGGGCCTCGGTGTGCCGTTCAATATTGCCAG 6590 Query 20520 TTATGCGCTGCTTACGTATATGATTGCACATGT 20552 |||||| |||| || | | |||||||| || Sbjct 6591 TTATGCTTTGCTCACACGTTTAATTGCACAAGT 6623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398936811420505