Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq19824 105 6e-18 seq49792 102 7e-17 seq19166 102 7e-17 seq19397 100 3e-16 seq35091 98.7 9e-16 seq7650 98.7 9e-16 seq45910 96.9 3e-15 seq10537 95.1 1e-14 seq50756 91.5 1e-13 seq45884 91.5 1e-13 seq40549 91.5 1e-13 seq146 89.7 5e-13 seq45780 87.8 2e-12 seq35349 87.8 2e-12 seq38859 86.0 6e-12 seq4850 86.0 6e-12 >seq19824 Length=8713 Score = 105 bits (116), Expect = 6e-18 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| || || || || |||| || ||||| || || | ||||| ||||| Sbjct 6560 CATGCAAATCTTTGTTAAAACCTTGACCGGAAAAACCATTACGTTGGACGTGGAACCCAA 6501 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| || ||| ||||| || ||| |||||||||||| | ||||| || || Sbjct 6500 CGACACCATCCAAAATGTCAAGGCGAAAATCCAGGACAAGGAAGGTATTCCGCCTGAGCA 6441 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 || ||||| || || || |||||||| || || || | ||| ||||||| || || Sbjct 6440 ACAACGTCTCATCTTTGCCGGCAAACAATTAGAGGATGGAAGAACTTTGAGCGACTACAA 6381 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTA 31402 ||| ||||||||| || | ||| ||||| Sbjct 6380 CATCCAAAAAGAAAGTACCTTGCATTTGGTA 6350 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| |||||| |||| || ||||| || || | ||||||||||| | Sbjct 6328 ATGCAAATCTTCGTTAAGACTTTGACTGGAAAAACAATTACGTTGGACGTTGAACCCAAC 6269 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| || | | |||||| | ||| || |||||||| | || || || || Sbjct 6268 GACACCATCCAGAATGTCAAAGCCAAAATTCAAGATAAGGAAGGAATTCCTCCAGAGCAA 6209 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||| |||| || || || ||||| ||||| || ||| |||| || || ||| Sbjct 6208 CAACGTTTAATTTTTGCGGGAAAACAATTGGAGGATGGCCGCACTTTGAGTGACTACAAC 6149 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 || |||||||| ||| | ||| |||| Sbjct 6148 ATCCAAAAAGAGAGCACTTTGCATTTGGT 6120 Score = 89.7 bits (98), Expect = 5e-13 Identities = 133/185 (72%), Gaps = 4/185 (2%) Strand=Plus/Minus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGA--CAGTG 31259 ||||| || ||| |||| || ||||| ||||| | || || ||||| ||| || | Sbjct 6781 TTCGTGAAAACTTTGACCGGAAAAACCATCACGTTGGATGTGGAACCCAACGATACAAT- 6723 Query 31260 TCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTC 31319 || ||||| | || | ||| |||||||||||| | || || || || || || Sbjct 6722 TCAAAACGTGAAGGCAAA-AATCCAAGACAAGGAAGGCATTCCTCCTGAACAACAACGAT 6664 Query 31320 TAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAA 31379 |||| || || || ||||| || |||||| | ||| ||||||||||||||||||||| Sbjct 6663 TAATCTTTGCAGGAAAACAATTAGAAGACGGTCGCACTTTGAGCGATTATAACATTCAAA 6604 Query 31380 AAGAA 31384 | ||| Sbjct 6603 AGGAA 6599 >seq49792 Length=5355 Score = 102 bits (112), Expect = 7e-17 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261 ||||| || ||| | || || ||||| ||||| | || |||||||| ||||| || Sbjct 551 TTCGTGAAAACTTTAACTGGGAAAACAATCACGTTGGATGTTGAACCCAACGACACGATC 610 Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321 ||| || ||| | ||| ||||||||||||| | || || || || || || || Sbjct 611 CAAAACGTGAAAGCCAAAATCCAGGACAAGGAAGGCATTCCTCCAGAGCAACAACGACTG 670 Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAA 31381 || || || || || || |||||||| | ||| |||||||||||||||| |||||| Sbjct 671 ATCTTTGCCGGAAAGCAATTGGAAGATGGAAGGACCTTGAGCGATTATAACATCCAAAAA 730 Query 31382 GAATCGACTCTTCATCTGGTA 31402 ||| || | ||| ||||| Sbjct 731 GAAAGCACATTGCATTTGGTA 751 Score = 91.5 bits (100), Expect = 1e-13 Identities = 132/184 (72%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261 || || ||||| |||| |||||||| || ||| | |||||||| || || | || Sbjct 233 TTTGTGAAGACATTGACGGGCAAAACCATAACCTTAGACGTTGAGCCCAATGATACAATC 292 Query 31262 GAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 ||| || || || ||| | |||||||||||| | || || || || || || | Sbjct 293 CAAAACGTTAAGGCAAAGA-TCCAAGACAAGGAAGGCATTCCACCAGAGCAACAACGATT 351 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380 ||| || ||||| |||||||||||||| | ||| |||||||||| ||||| ||||| Sbjct 352 AATCTTTGCTGGAAAACAGTTGGAAGATGGAAGAACTTTGAGCGATTACAACATCCAAAA 411 Query 31381 AGAA 31384 ||| Sbjct 412 GGAA 415 >seq19166 Length=5045 Score = 102 bits (112), Expect = 7e-17 Identities = 133/184 (72%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 |||||| |||||| ||||||||||||| || ||| | || || || ||| |||| | Sbjct 4969 TTTCGTGAAGACTTTGACAGGCAAAACCATTACCTTGGATGTCGAGCCGAATGACACGAT 4910 Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 | ||| ||||| || ||| ||||||||||| | || || || || || || || Sbjct 4909 CCAAAATGTCAAGGCGAAAATCCAAGACAAGGAAGGAATCCCCCCTGAACAACAACGCCT 4850 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380 || || || || ||||| |||||||| | ||| | ||||| || ||||||||||| Sbjct 4849 GATTTTTGCAGGAAAACAATTGGAAGATGGAAGAACTTTAAGCGACTACAACATTCAAAA 4790 Query 31381 AGAA 31384 |||| Sbjct 4789 AGAA 4786 >seq19397 Length=4183 Score = 100 bits (110), Expect = 3e-16 Identities = 132/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261 ||||| |||||| |||| || ||||| || || | || ||||| || ||||| || Sbjct 3900 TTCGTGAAGACTTTGACTGGAAAAACAATTACGTTGGATGTTGAGCCCAACGACACCATC 3959 Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321 ||| |||||| || ||| |||||||||||| | || || || || || ||| | Sbjct 3960 CAAAACGTCAAAGCGAAAATTCAGGACAAGGAAGGAATTCCCCCTGAGCAACAACGTTTG 4019 Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAA 31381 || || || ||||| || ||||| ||| ||| |||||||||| ||||| |||||| Sbjct 4020 ATCTTTGCCGGCAAGCAATTGGAGGACGGCCGAACTTTGAGCGATTACAACATCCAAAAA 4079 Query 31382 GAA 31384 ||| Sbjct 4080 GAA 4082 >seq35091 Length=3122 Score = 98.7 bits (108), Expect = 9e-16 Identities = 132/184 (72%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 |||||| |||||| |||| |||||||| || ||| | || |||||| | ||||| | Sbjct 1071 TTTCGTGAAGACTTTGACCGGCAAAACCATTACCTTAGATGTTGAAGCCAACGACACGAT 1130 Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 | ||| |||||| | ||| || |||||||| | || || || || || || | Sbjct 1131 CCAAAATGTCAAAGCAAAAATTCAAGATAAGGAAGGAATCCCCCCTGAACAACAACGCTT 1190 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380 || || || || ||||| ||||||||| | ||| | ||||| || ||||||||||| Sbjct 1191 GATTTTTGCAGGAAAACAATTGGAAGACGGAAGAACTTTAAGCGACTACAACATTCAAAA 1250 Query 31381 AGAA 31384 |||| Sbjct 1251 AGAA 1254 Score = 87.8 bits (96), Expect = 2e-12 Identities = 129/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261 || || || ||||| || || ||||| ||||| | |||||||| || |||| || Sbjct 756 TTTGTGAAAACTCTAACTGGGAAAACAATCACATTGGACGTTGAGCCCAATGACACGATC 815 Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321 ||| || ||| | ||| |||||||||||| | || || || ||||| || || Sbjct 816 CAAAATGTGAAAGCCAAAATCCAAGACAAGGAAGGCATTCCTCCAGAACAGCAACGATTA 875 Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAA 31381 || || || || ||||| || ||||| | ||| |||| || |||||||| |||||| Sbjct 876 ATCTTTGCCGGAAAACAATTAGAAGATGGAAGGACCTTGAGTGACTATAACATCCAAAAA 935 Query 31382 GAA 31384 ||| Sbjct 936 GAA 938 Score = 86.0 bits (94), Expect = 6e-12 Identities = 131/184 (71%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261 ||||| ||||| |||| || ||||| || ||| | |||||||| || |||| || Sbjct 435 TTCGTGAAGACCTTGACTGGTAAAACCATTACCTTAGACGTTGAGCCCAATGACACGATC 494 Query 31262 GAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 ||| ||||| || ||| | ||||||||||| | || || || || ||||| | Sbjct 495 CAAAACGTCAAGGCAAAGA-TCCAAGACAAGGAAGGTATTCCACCAGAGCAACAGCGCTT 553 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380 ||| || ||||| || || |||||||| | || |||||||||| ||||| ||||| Sbjct 554 AATCTTTGCTGGAAAGCAATTGGAAGATGGAAGAACCTTGAGCGATTACAACATCCAAAA 613 Query 31381 AGAA 31384 ||| Sbjct 614 GGAA 617 >seq7650 Length=7814 Score = 98.7 bits (108), Expect = 9e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 23006 ACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTG 23065 ||||||||| | || ||||| || | |||||| || ||||| ||||| || ||| Sbjct 2887 ACAAACTTGGGCAATGCAATCGACGCCAAATTGCACACTGCCACTTCGTCCGGAGATGTG 2946 Query 23066 TACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTG 23125 ||||| |||||||| || || | ||| ||||||| ||||||||||| | |||||| Sbjct 2947 TACTCCACAATTTCCGTGCACAAATTCGATGACTTTATTGTGCCCAAATTCTTTTGGTTG 3006 Query 23126 CTTTTTCGATTGCA 23139 || ||||||||||| Sbjct 3007 CTCTTTCGATTGCA 3020 Score = 96.9 bits (106), Expect = 3e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 22141 TTTGGTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTAT 22200 ||| ||||| ||||||||||| ||||| || || ||| | | ||| | ||||| || || Sbjct 1941 TTTTGTGCGCAGATAATACATTCCCGTTTTAAGTCCCTTTTCCCAGCCATAAAAGTGCAT 2000 Query 22201 CGACGTCAATTTTCCATAACTCG-GCAAGTCCATGTACACATTGAACGACTGACTCTGAT 22259 |||| |||||| ||| || | | || | ||||| | || | ||| ||| |||| Sbjct 2001 GGACGACAATTTACCAAAATTGGCGCCCAT-CATGTGTATGTTCAGCGATTGAGATTGAT 2059 Query 22260 CGATAAACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATA 22319 | ||||||||||| |||||||| ||||||| || | ||| || |||||||| | Sbjct 2060 CAATAAACGCTCCGCGATCGGCAGCCATATCAATGATTGTTTTTTGAGAAATTTCCCACA 2119 Query 22320 CGGTCTTGTACA 22331 | || || |||| Sbjct 2120 CCGTTTTATACA 2131 >seq45910 Length=1805 Score = 96.9 bits (106), Expect = 3e-15 Identities = 131/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261 || || || || || || || ||||| ||||| | || |||||||| |||| || Sbjct 129 TTTGTGAAAACCCTAACTGGGAAAACAATCACATTGGATGTTGAACCCAATGACACGATC 188 Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321 ||| || ||| | || |||||||||||| | || || || ||||| || ||| Sbjct 189 CAAAATGTGAAAGCCAAGATCCAAGACAAGGAAGGCATTCCTCCAGAACAGCAACGACTA 248 Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAA 31381 || || ||||| ||||| || ||||| | ||| |||| |||||||||||||||||| Sbjct 249 ATCTTTGCTGGAAAACAATTAGAAGATGGAAGGACCTTGAGTGATTATAACATTCAAAAA 308 Query 31382 GAA 31384 ||| Sbjct 309 GAA 311 >seq10537 Length=5798 Score = 95.1 bits (104), Expect = 1e-14 Identities = 120/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 23791 CATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGAC 23850 ||| ||||||||||| || ||||| || || | |||||| ||| ||||||| || || Sbjct 5254 CATCAGATTGTACGTTTCTATGGCAGCGTCCAAGTCCTCCATGTGAATACCGAGGGACAC 5195 Query 23851 GCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGA 23910 ||||| | ||||| || ||||||||| | | | || || | ||||| || || || Sbjct 5194 TCGCATGAGCATGTGCTGTGGTCTCTCGGCAATTTCTCCATTTAATTTGAGCAAGTAGGA 5135 Query 23911 ACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACG 23955 || | | |||||||| || || |||||||| | |||||| || Sbjct 5134 TCGCTCAAGCGTTTTAATACCGAAGTAGTCATAATCAAAGTCCCG 5090 >seq50756 Length=522 Score = 91.5 bits (100), Expect = 1e-13 Identities = 121/168 (72%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 31217 ACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAG 31276 || || ||||| ||||| | || || ||||| ||| | | || ||| || ||| Sbjct 378 ACTGGAAAAACTATCACGTTGGATGTGGAACCCAACGATACTATCCAAAACGTAAAAGCC 319 Query 31277 AGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAA 31336 | ||| ||| || |||||| | || | || ||||| ||| | || || || |||||| Sbjct 318 AAAATTCAGGATAATGAAGGCATTCCTCATGAACAGCAACGTTTGATTTTTGCCGGCAAA 259 Query 31337 CAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAA 31384 || ||||| ||| | ||| |||||||||||||||||||||||||| Sbjct 258 CAATTGGATGACGGTCGTACTTTGAGCGATTATAACATTCAAAAAGAA 211 >seq45884 Length=997 Score = 91.5 bits (100), Expect = 1e-13 Identities = 130/183 (71%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261 ||||| |||||| |||| || || || | || | ||||||||||| ||||| || Sbjct 363 TTCGTGAAGACTTTGACTGGAAACACAGTTACGTTGGACGTTGAACCCAACGACACCATC 422 Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321 ||| |||||| || ||| |||||| ||||| | || || || || |||||| | Sbjct 423 CAAAATGTCAAAGCGAAAATTCAGGACAATGAAGGAATTCCCCCAGAGCAACAGCGTTTG 482 Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAA 31381 || || || ||||| || ||| | || ||| |||| ||||||||||||||||| Sbjct 483 ATCTTTGCCGGCAAGCAATTGTAGGATGGCCGAACTTTGAGTGATTATAACATTCAAAAG 542 Query 31382 GAA 31384 ||| Sbjct 543 GAA 545 >seq40549 Length=748 Score = 91.5 bits (100), Expect = 1e-13 Identities = 130/183 (71%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261 ||||| || || |||| || || |||||||| | ||||| || || ||| | | || Sbjct 138 TTCGTGAAAACCTTGACCGGTAAGACGATCACGTTGGACGTAGAGCCCAACGATACTATC 197 Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321 ||| || ||| | ||| ||| || |||||| | || || || || ||||| | Sbjct 198 CAAAATGTTAAAGCCAAAATTCAGGATAAAGAAGGCATTCCTCCTGAGCAACAGCGATTG 257 Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAA 31381 || ||||||||||| || ||||||||| | || ||||||| || ||||||||||| Sbjct 258 ATTTTCGCTGGCAAGCAATTGGAAGACGGTCGCACATTGAGCGACTACAACATTCAAAAG 317 Query 31382 GAA 31384 ||| Sbjct 318 GAA 320 >seq146 Length=10098 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/230 (70%), Gaps = 3/230 (1%) Strand=Plus/Plus Query 22104 TCTTG-TCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATG 22162 ||||| || || || || | ||||| | ||| || | ||| || | | ||||||||| Sbjct 8138 TCTTGATCAACAGTGAATTTGATGGCATCTGCAGCAGCTTTAGTCCTCAAGTAATACATG 8197 Query 22163 CCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTC 22222 || || || || ||| | | ||| | |||||||| || |||| |||||| ||| || | Sbjct 8198 CCAGTTTTTAGCCCCTTTTCCCAGCCATAAAAATGCATTGACGACAATTTGCCAAAATTA 8257 Query 22223 G-GCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGC 22281 | || | ||||| | ||| ||||| ||| |||||| | ||||||||| | || || Sbjct 8258 GCGCCCAT-CATGTGTATATTCAACGATTGAGACTGATCAACAAACGCTCCCCTGTCAGC 8316 Query 22282 GGCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACA 22331 ||||||| | | ||| || |||||||| || ||||| |||| Sbjct 8317 AGCCATATCCACGACTGTTTTTTGTGATATTTCCCAAACAGTCTTATACA 8366 >seq45780 Length=809 Score = 87.8 bits (96), Expect = 2e-12 Identities = 129/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261 ||||| || || |||| ||||| ||||| || | ||||| || || ||| | | || Sbjct 748 TTCGTGAAAACCTTGACCGGCAAGACGATAACGTTGGACGTAGAGCCTAACGATACTATC 689 Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321 ||| || || | ||| ||| || |||||| | || || || || ||||| | Sbjct 688 CAAAATGTTAAGGCCAAAATTCAGGATAAAGAAGGCATTCCTCCTGAGCAACAGCGATTG 629 Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAA 31381 || ||||||||||| || ||||||||| | || |||||||||| || |||||||| Sbjct 628 ATTTTCGCTGGCAAGCAATTGGAAGACGGTCGCACATTGAGCGATTACAATATTCAAAAG 569 Query 31382 GAA 31384 ||| Sbjct 568 GAA 566 >seq35349 Length=2359 Score = 87.8 bits (96), Expect = 2e-12 Identities = 131/185 (71%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 31217 ACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAG 31276 ||||| ||||| ||||| | || || ||||| ||||| | || ||| || ||| | Sbjct 248 ACAGGAAAAACTATCACGTTGGATGTGGAACCCAACGACACTATCTAAAACGTGAAA--G 305 Query 31277 AGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAA 31336 ||| |||||| |||||| | || || || || || ||| | || || || |||||| Sbjct 306 CCAATTCAGGACAATGAAGGCATTCCTCCTGAACAACAACGTTTGATCTTTGCCGGCAAA 365 Query 31337 CAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCAT 31396 || ||||| || ||| |||| ||||||||||| ||||||||| || || ||| Sbjct 366 CAATTGGAGGATGGCCGTACTTTGAGTGATTATAACATCCAAAAAGAAAGCACCCTGCAT 425 Query 31397 CTGGT 31401 |||| Sbjct 426 TTGGT 430 >seq38859 Length=993 Score = 86.0 bits (94), Expect = 6e-12 Identities = 131/184 (71%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261 ||||| ||||| ||||| |||||||| || ||| | |||||||| || |||| || Sbjct 633 TTCGTGAAGACCCTGACCGGCAAAACCATTACCTTAGACGTTGAGCCCAATGACACGATC 692 Query 31262 GAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 ||| ||||| || ||| | ||||||||||| | || || || || ||||| | Sbjct 693 CAAAACGTCAAGGCAAAGA-TCCAAGACAAGGAAGGTATTCCACCAGAGCAACAGCGCTT 751 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380 ||| || ||||| || || |||||||| | || |||| ||||| || || ||||| Sbjct 752 AATCTTTGCTGGAAAGCAATTGGAAGATGGAAGAACCTTGAGTGATTACAATATCCAAAA 811 Query 31381 AGAA 31384 ||| Sbjct 812 GGAA 815 >seq4850 Length=1942 Score = 86.0 bits (94), Expect = 6e-12 Identities = 131/184 (71%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACA-GTGT 31260 ||||| || ||| | ||||| ||||| || || | ||||| || || ||||| | | Sbjct 340 TTCGTGAAAACTTTAACAGGAAAAACAATTACGTTGGACGTCGAGCCCAACGACACGATT 281 Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 | ||||| | ||| | ||| ||||| |||||| | || || || || || || | Sbjct 280 CAAAACG-TGAAAGCCAAAATCCAAGACAATGAAGGCATTCCTCCAGAGCAACAACGATT 222 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380 ||| || || | ||| | |||||||| | |||| |||| ||||||||||||||||| Sbjct 221 AATTTTTGCCTGAAAATAATTGGAAGATGGAAGGACTTTGAGTGATTATAACATTCAAAA 162 Query 31381 AGAA 31384 |||| Sbjct 161 AGAA 158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445483288187280