Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq7650 96.9 7e-15 >seq7650 Length=7814 Score = 96.9 bits (106), Expect = 7e-15 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 94167 CACAAACTTGTTGACTGCGATAGAAGCCAAATTGCACACTGCAGTTTCCTCCGAATCACT 94226 |||||||||| | ||| || || ||||||||||||||||| ||| |||| | | Sbjct 2886 CACAAACTTGGGCAATGCAATCGACGCCAAATTGCACACTGCCACTTCGTCCGGAGATGT 2945 Query 94227 GTACTGGACAATTTCAGTGCACAAATTTGAAGACTTGATGATGCCGACATTTTCTTGGTT 94286 ||||| |||||||| ||||||||||| || ||||| || |||| | ||| | |||||| Sbjct 2946 GTACTCCACAATTTCCGTGCACAAATTCGATGACTTTATTGTGCCCAAATTCTTTTGGTT 3005 Query 94287 AGACTTTCTATTG 94299 ||||| |||| Sbjct 3006 GCTCTTTCGATTG 3018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 988939790402595