Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq12010 86.0 6e-12 >seq12010 Length=13650 Score = 86.0 bits (94), Expect = 6e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 13659 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 13718 ||| || |||||| || | || || || | |||||| ||||| || ||| || | Sbjct 5637 ACAAGCGAAATCAGTGTGCAATCCTTCGTCACGACTAATTAGTTCATTGCTAAACGTAAG 5696 Query 13719 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAA 13778 ||||||||||| || || || |||| ||||||||||||| ||||||||| || || Sbjct 5697 GCCTGGCATCAAACCACGCTTCTTTAGCCAAAATATTGCACAAAATGATCCGCTGAAAAA 5756 Query 13779 TATTCCCTCAAC 13790 ||||||||| || Sbjct 5757 TATTCCCTCTAC 5768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478284842270760