Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq45780 109 4e-19 seq19397 105 5e-18 seq19824 104 2e-17 seq45910 102 6e-17 seq40549 100 2e-16 seq38859 100 2e-16 seq27925 98.7 8e-16 seq50756 95.1 9e-15 seq35091 95.1 9e-15 seq35349 93.3 3e-14 seq48569 89.7 4e-13 seq29189 87.8 1e-12 seq41098 84.2 2e-11 seq32733 84.2 2e-11 seq45884 82.4 6e-11 seq19166 82.4 6e-11 seq11259 82.4 6e-11 >seq45780 Length=809 Score = 109 bits (120), Expect = 4e-19 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 42898 AACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCG 42957 || || ||||| | ||| || |||||||| | |||||||||| |||||| || |||| Sbjct 546 AAGACTAAATGTAAAGTACTTTCCTTTTGAATATTGTAATCGCTCAATGTGCGACCGTCT 605 Query 42958 TCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCG 43017 |||||||| ||||| || ||||||||||||||||| || | || | |||||||| || Sbjct 606 TCCAATTGCTTGCCAGCGAAAATCAATCGCTGTTGCTCAGGAGGAATGCCTTCTTTATC- 664 Query 43018 CTG-ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGT 43076 ||| || | || || | | || ||| || ||| ||||| | |||||| || Sbjct 665 CTGAATTTTGGCCTTAACATTTTGGATAGTATCGTTAGGCTCTACGTCCAACGTTATCGT 724 Query 43077 TTTTCCGGTTAGAGTTTTCACAAA 43100 || ||||| | |||||||| || Sbjct 725 CTTGCCGGTCAAGGTTTTCACGAA 748 >seq19397 Length=4183 Score = 105 bits (116), Expect = 5e-18 Identities = 168/236 (71%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 42866 TACATATCCAATCGTCGCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTT 42925 ||||| | || ||| | || || |||| | ||||||||||| | ||||| || |||| Sbjct 4132 TACATTTGCA-TCG-CACCACCTCGCAAACGCAACACCAAATGCAAGGTGCTTTCTTTTT 4075 Query 42926 GCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATC 42985 | | ||||||||| ||| || || |||| |||||||| ||||||||||| ||||| | Sbjct 4074 GGATGTTGTAATCGCTCAAAGTTCGGCCGTCCTCCAATTGCTTGCCGGCAAAGATCAAAC 4015 Query 42986 GCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG-ATCAACTCTTTGACTCTGCCAACT 43044 | ||||| || | || | ||||| || || ||| || | ||||||| | | Sbjct 4014 GTTGTTGCTCAGGGGGAATTCCTTCCTTGTC-CTGAATTTTCGCTTTGACGTTTTGGATG 3956 Query 43045 GTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAA 43100 |||||| | ||| || || | ||| || |||||||| || | ||| ||||| || Sbjct 3955 GTGTCGTTGGGCTCAACATCCAACGTAATTGTTTTTCCAGTCAAAGTCTTCACGAA 3900 >seq19824 Length=8713 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||||| | || |||||||| | || || || ||||| | ||||| ||| | Sbjct 6333 CCACCACGCAAACGCAATACCAAATGCAAGGTACTTTCTTTTTGGATGTTGTAGTCGCTC 6392 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || || | | | || || ||||||||||||||||| || | || ||||| || | ||| Sbjct 6393 AAAGTTCTTCCATCCTCTAATTGTTTGCCGGCAAAGATGAGACGTTGTTGCTCAGGCGGA 6452 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | |||||| || || ||| | | ||||| | | |||||| | || ||| Sbjct 6453 ATACCTTCCTTGTCCTGGATTTTCGCCTTGACATTTTGGATGGTGTCGTTGGGTTCCACG 6512 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | ||| || ||||||||||| | ||||| ||||| |||||||| Sbjct 6513 TCCAACGTAATGGTTTTTCCGGTCAAGGTTTTAACAAAGATTTGCAT 6559 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 42898 AACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCG 42957 ||||||||||| | ||||||||| ||||| | ||||| || ||| || || | || Sbjct 6117 AACACCAAATGCAAAGTGCTCTCTTTTTGGATGTTGTAGTCACTCAAAGTGCGGCCATCC 6176 Query 42958 TCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCG 43017 ||||||||||| || |||||||| || || ||||| || | || | ||||| || || Sbjct 6177 TCCAATTGTTTTCCCGCAAAAATTAAACGTTGTTGCTCTGGAGGAATTCCTTCCTTATCT 6236 Query 43018 CTGATCAACTCTTTGAC--TCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAG 43075 || ||||||| |||| | |||||| | || ||||| | ||| || | Sbjct 6237 TGAATTTTGGCTTTGACATTCTG--GATGGTGTCGTTGGGTTCAACGTCCAACGTAATTG 6294 Query 43076 TTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 ||||||| || | ||| || || || |||||||| Sbjct 6295 TTTTTCCAGTCAAAGTCTTAACGAAGATTTGCAT 6328 Score = 87.8 bits (96), Expect = 1e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 42900 CACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTC 42959 ||||||||| | ||||| |||||||| | || |||||| ||| || || |||| || Sbjct 6581 CACCAAATGTAAGGTGCTTTCCTTTTGAATGTTATAATCGCTCAAAGTGCGACCGTCTTC 6640 Query 42960 CAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCT 43019 |||||||| || ||||| || ||||| ||||| || | || | ||||| || || Sbjct 6641 TAATTGTTTTCCTGCAAAGATTAATCGTTGTTGTTCAGGAGGAATGCCTTCCTTGTCTTG 6700 Query 43020 GATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTT 43079 ||| | || || | || ||| ||| | || || || | ||| || ||||| Sbjct 6701 GATTTTTGCCTTCACGTTTTGAATTGTATCGTTGGGTTCCACATCCAACGTGATGGTTTT 6760 Query 43080 TCCGGTTAGAGTTTTCACAAA 43100 |||||| | ||||||||| || Sbjct 6761 TCCGGTCAAAGTTTTCACGAA 6781 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 42898 AACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCG 42957 ||||||||||| | ||||| |||||||| | || || ||| ||| || || |||| Sbjct 7177 AACACCAAATGCAAGGTGCTTTCCTTTTGGATGTTATAGTCGCTCAAAGTGCGACCGTCT 7236 Query 42958 TCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCG 43017 |||||||| || || ||||| |||| || ||||| || | || | || ||||| || Sbjct 7237 TCCAATTGCTTTCCTGCAAAGATCAGACGTTGTTGCTCTGGAGGAATTCCCTCTTTATC- 7295 Query 43018 CTG-ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGT 43076 ||| || |||| || | | ||| ||| | || || || | ||| || || Sbjct 7296 CTGAATTTTGGCTTTCACGTTTTGGATTGTATCGTTGGGTTCCACATCCAACGTAATGGT 7355 Query 43077 TTTTCCGGTTAGAGTTTTCACAAA 43100 ||||||||||| ||| |||||||| Sbjct 7356 TTTTCCGGTTAAAGTCTTCACAAA 7379 >seq45910 Length=1805 Score = 102 bits (112), Expect = 6e-17 Identities = 167/241 (69%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 ||| ||||||| | ||||||||| || | ||||| || ||||| | |||||| ||| Sbjct 669 GCCACCACGCAAACGTAACACCAAGTGCAACGTGCTTTCTTTTTGAATATTGTAGTCGCT 610 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 || || | | | || ||||||||||| || ||||||||||| |||||||| || | || Sbjct 609 TAAAGTTCTTCCATCTTCCAATTGTTTTCCCGCAAAAATCAAGCGCTGTTGTTCAGGGGG 550 Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061 | ||||| || || || | | ||||| | | ||||| | |||||| Sbjct 549 TATTCCTTCCTTATCTTGAATTTTCGCCTTGACATTTTGGATCGTGTCATTGGGCTCGAC 490 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTTCTTAATTTT 43121 |||| || || ||||| || |||| ||| ||||| ||| | | |||| || |||| Sbjct 489 ATCTAAGGTAATGGTTTTACCAGTTAAAGTCTTCACGAAACTGTTTTTTTTTTTTTTTTT 430 Query 43122 A 43122 | Sbjct 429 A 429 >seq40549 Length=748 Score = 100 bits (110), Expect = 2e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 42898 AACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCG 42957 |||||||| || | ||| || |||||||| | ||||| ||| |||||| || |||| Sbjct 340 AACACCAAGTGTAAAGTACTTTCCTTTTGAATGTTGTAGTCGCTCAATGTGCGACCGTCT 281 Query 42958 TCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCG 43017 |||||||| ||||| || ||||||||||||||||| || | || | |||||||| || Sbjct 280 TCCAATTGCTTGCCAGCGAAAATCAATCGCTGTTGCTCAGGAGGAATGCCTTCTTTATC- 222 Query 43018 CTG-ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGT 43076 ||| || |||| || | | || ||| | ||| ||||| | ||| || || Sbjct 221 CTGAATTTTGGCTTTAACATTTTGGATAGTATCGTTGGGCTCTACGTCCAACGTGATCGT 162 Query 43077 TTTTCCGGTTAGAGTTTTCACAAA 43100 || ||||| | |||||||| || Sbjct 161 CTTACCGGTCAAGGTTTTCACGAA 138 >seq38859 Length=993 Score = 100 bits (110), Expect = 2e-16 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 42898 AACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCG 42957 ||||||||||| | ||||| |||||||| | ||||||||| ||| || | | | || Sbjct 835 AACACCAAATGCAACGTGCTTTCCTTTTGGATATTGTAATCACTCAAGGTTCTTCCATCT 776 Query 42958 TCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCG 43017 |||||||| || || ||||| || || |||||||| || | || | |||||| || || Sbjct 775 TCCAATTGCTTTCCAGCAAAGATTAAGCGCTGTTGCTCTGGTGGAATACCTTCCTTGTCT 716 Query 43018 CTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTT 43077 |||| | ||||| | | ||||| | ||| ||||||| || || ||| Sbjct 715 TGGATCTTTGCCTTGACGTTTTGGATCGTGTCATTGGGCTCAACGTCTAAGGTAATGGTT 656 Query 43078 TTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTTCTTAATTTTATTTGTAC 43129 || ||||| || || ||||| || | | | |||| || |||| |||| || Sbjct 655 TTGCCGGTCAGGGTCTTCACGAAGCTATACGTTTTGTT--TTTTTTTTGCAC 606 >seq27925 Length=8008 Score = 98.7 bits (108), Expect = 8e-16 Identities = 156/222 (70%), Gaps = 4/222 (2%) Strand=Plus/Minus Query 42881 CGCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGG 42940 |||| || || | || || ||||| || | ||||| |||||||| | |||||||| Sbjct 7929 CGCCGCCTCGTAATCGCAATACCAAGTGCAATGTGCTTTCCTTTTGGATGTTGTAATCAC 7870 Query 42941 ACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCG 43000 ||| || || | || |||||||| || |||||||| |||||||| || || || | | Sbjct 7869 TCAAGGTTCGACCATCCTCCAATTGCTTTCCGGCAAAGATCAATCGTTGCTGCTCTGGTG 7810 Query 43001 GCACACCTTCTTTTTCGCTGATCAACTCTTTGAC--TCTGCCAACTGTGTCGCCAGCCTC 43058 | | ||||| || || ||| | || || |||| | |||||| ||||| Sbjct 7809 GAATGCCTTCCTTGTCTTGGATTTTGGCCTTCACGTTCTGG--ATCGTGTCGTTGGCCTC 7752 Query 43059 GACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAA 43100 |||||| | ||| || |||||||| |||| |||||||| || Sbjct 7751 GACGTCCAACGTGATTGTTTTTCCAGTTAAGGTTTTCACGAA 7710 >seq50756 Length=522 Score = 95.1 bits (104), Expect = 9e-15 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 42898 AACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCG 42957 || |||||||| | ||||| || ||||| | || |||||| ||| ||||| |||| Sbjct 191 AAGACCAAATGCAAGGTGCTTTCTTTTTGAATGTTATAATCGCTCAAAGTACGACCGTCA 250 Query 42958 TCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCG 43017 |||||||||||||||||||||||||| || || || || || | ||||| || || Sbjct 251 TCCAATTGTTTGCCGGCAAAAATCAAACGTTGCTGTTCATGAGGAATGCCTTCATTATC- 309 Query 43018 CTG-ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGT 43076 ||| || |||| || | | || ||| | || || || | ||| ||||| Sbjct 310 CTGAATTTTGGCTTTTACGTTTTGGATAGTATCGTTGGGTTCCACATCCAACGTGATAGT 369 Query 43077 TTTTCCGGTTAGAGTTTTCACAAA 43100 |||||| |||| ||||||||||| Sbjct 370 TTTTCCAGTTAAGGTTTTCACAAA 393 >seq35091 Length=3122 Score = 95.1 bits (104), Expect = 9e-15 Identities = 153/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 ||| ||||||| | ||||||||| || | ||||| || ||||| | ||||| ||| Sbjct 1290 GCCACCACGCAAACGTAACACCAAGTGTAACGTGCTTTCTTTTTGAATGTTGTAGTCGCT 1231 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 || || | | |||| ||||||||||| || ||||||||||| || ||||| || | || Sbjct 1230 TAAAGTTCTTCCGTCTTCCAATTGTTTTCCTGCAAAAATCAAGCGTTGTTGTTCAGGGGG 1171 Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061 | ||||| || || || ||||||| | | |||||| || || || Sbjct 1170 GATTCCTTCCTTATCTTGAATTTTTGCTTTGACATTTTGGATCGTGTCGTTGGCTTCAAC 1111 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAA 43101 |||| || || ||||| ||||| | ||| ||||| ||| Sbjct 1110 ATCTAAGGTAATGGTTTTGCCGGTCAAAGTCTTCACGAAA 1071 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 42898 AACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCG 42957 || |||||||| | || || |||||||| | || || || || || || |||| Sbjct 292 AATACCAAATGCAATGTACTTTCCTTTTGGATGTTATAGTCACTTAAGGTTCGGCCGTCC 233 Query 42958 TCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCG 43017 || |||||||| |||||||| |||||||| || || || | || | ||||| || || Sbjct 232 TCTAATTGTTTTCCGGCAAAGATCAATCGTTGCTGCTCTGGTGGGATGCCTTCCTTGTCT 173 Query 43018 CTGATCAACTCTTTGAC--TCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAG 43075 || |||| || |||| | |||||| || ||||||||| | |||||| | Sbjct 172 TGAATTTTGGCTTTCACGTTCTGG--ATCGTGTCGTTAGGCTCGACGTCCAACGTTATTG 115 Query 43076 TTTTTCCGGTTAGAGTTTTCACAAA 43100 |||||||||| | ||||| || || Sbjct 114 TTTTTCCGGTCAAGGTTTTTACGAA 90 >seq35349 Length=2359 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/205 (71%), Gaps = 7/205 (3%) Strand=Plus/Minus Query 42898 AACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCG 42957 || |||||||| | ||||| || ||||| | || ||||| ||| ||||| | || Sbjct 433 AAGACCAAATGCAGGGTGCTTTCTTTTTGGATGTTATAATCACTCAAAGTACGGCCATCC 374 Query 42958 TCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCG 43017 |||||||||||||||||||| ||||| || ||||| || | || | ||||| || || Sbjct 373 TCCAATTGTTTGCCGGCAAAGATCAAACGTTGTTGTTCAGGAGGAATGCCTTCATTGTC- 315 Query 43018 CTGATCAACT--CTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAG 43075 ||| || | |||| || | | |||||| | || || || | ||| |||| Sbjct 314 CTG---AATTGGCTTTCACGTTTTAGATAGTGTCGTTGGGTTCCACATCCAACGTGATAG 258 Query 43076 TTTTTCCGGTTAGAGTTTTCACAAA 43100 ||||||| |||| || ||||||||| Sbjct 257 TTTTTCCTGTTA-AGGTTTCACAAA 234 >seq48569 Length=404 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 42898 AACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCG 42957 ||||||||||| | ||||| |||||||| | || |||||| || || | | || Sbjct 284 AACACCAAATGCAAGGTGCTTTCCTTTTGGATGTTATAATCGATCAGGGTGCAGCCATCC 225 Query 42958 TCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCG 43017 |||||||| ||||||||||| || ||||||||||| || | || | ||||| || || Sbjct 224 TCCAATTGCTTGCCGGCAAAGATTAATCGCTGTTGCTCAGGAGGAATACCTTACTTATCC 165 Query 43018 CTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTT 43077 ||| |||| || | | ||||| | ||| || || | ||| || ||| Sbjct 164 TGGATTTTGGCTTTCACGTTTTGGATAGTGTCATTGGGCTCCACATCCAACGTGATGGTT 105 Query 43078 TTTCCGGTTAGAGTTTTCACAAAA 43101 ||||| || | ||||||||| ||| Sbjct 104 TTTCCAGTCAAAGTTTTCACGAAA 81 >seq29189 Length=1803 Score = 87.8 bits (96), Expect = 1e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| | || || |||||||| | ||||| |||||||| | ||||||||| | Sbjct 816 CCACCACGTAATCGCAAGACCAAATGCAAGGTGCTTTCCTTTTGGATGTTGTAATCGCTC 875 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATC 42995 ||||| | |||| || ||||||||||| || ||||| || || |||||||| Sbjct 876 AATGTGCAGCCGTCTTCTAATTGTTTGCCAGCGAAAATTAAGCGTTGTTGATC 928 >seq41098 Length=1582 Score = 84.2 bits (92), Expect = 2e-11 Identities = 140/201 (70%), Gaps = 1/201 (0%) Strand=Plus/Minus Query 42901 ACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCC 42960 |||||||| | ||||| |||||||| | |||||||| ||| ||||| |||| ||| Sbjct 792 ACCAAATGTAACGTGCTTTCCTTTTGGATGTTGTAATCACTCAAAGTACGGCCGTCTTCC 733 Query 42961 AATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG 43020 ||||| || || ||||| |||| || || || || || | ||||||||| || | Sbjct 732 AATTGCTTTCCCGCAAAGATCAGACGTTGCTGTTCATGAGGAATACCTTCTTTGTCTTGG 673 Query 43021 ATCAACTCTTTGACTCTGCCAACTGTG-TCGCCAGCCTCGACGTCTACCGTTATAGTTTT 43079 ||| ||||||| | | ||| ||| | || || || | ||| || ||||| Sbjct 672 ATCTTTGCTTTGACGTTTTGGATAGTGCTCGTTGGATTCCACATCCAACGTAATGGTTTT 613 Query 43080 TCCGGTTAGAGTTTTCACAAA 43100 | | || | |||||||||||| Sbjct 612 TACCGTCAAAGTTTTCACAAA 592 Score = 82.4 bits (90), Expect = 6e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 42898 AACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCG 42957 ||||||||||| | ||||| || ||||| | || ||||| ||| ||||| |||| Sbjct 437 AACACCAAATGCAAGGTGCTTTCTTTTTGAATGTTATAATCACTCAAAGTACGGCCGTCC 378 Query 42958 TCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATC 42995 |||||||||||||| ||||| ||||| || ||||| || Sbjct 377 TCCAATTGTTTGCCAGCAAAGATCAAACGTTGTTGCTC 340 >seq32733 Length=1362 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 42898 AACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCG 42957 ||||| || || | ||||| | |||||| | || |||||| ||| || || |||| Sbjct 256 AACACTAAGTGCAAGGTGCTTTTCTTTTGAATGTTATAATCGCTCAAAGTTCGGCCGTCT 197 Query 42958 TCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCG 43017 |||||||| |||| |||||| ||||| | ||||| || | || | ||||| || || Sbjct 196 TCCAATTGCTTGCAGGCAAAGATCAAATGTTGTTGCTCTGGGGGAATTCCTTCATTGTC- 138 Query 43018 CTGATCAACT-CTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGT 43076 |||| | ||||||| | | ||||| | ||| || || | ||| || || Sbjct 137 CTGAATTTTTGCTTTGACGTTTTGGATGGTGTCATTGGGCTCCACATCCAACGTGATGGT 78 Query 43077 TTTTCCGGTTAGAGTTTTCACAAAA 43101 |||||| || | ||||||||||||| Sbjct 77 TTTTCCCGTCAAAGTTTTCACAAAA 53 >seq45884 Length=997 Score = 82.4 bits (90), Expect = 6e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 42898 AACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCG 42957 |||||||||| | ||||| |||||||| | || ||||| ||| || || | || Sbjct 565 AACACCAAATTCAAGGTGCTTTCCTTTTGAATGTTATAATCACTCAAAGTTCGGCCATCC 506 Query 42958 TCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCG 43017 | |||||| ||||||||||| ||||| |||||||| || | || | ||||| || || Sbjct 505 TACAATTGCTTGCCGGCAAAGATCAAACGCTGTTGCTCTGGGGGAATTCCTTCATTGTC- 447 Query 43018 CTG-ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGT 43076 ||| || | ||||||| | | |||||| | || ||||| | ||| | || Sbjct 446 CTGAATTTTCGCTTTGACATTTTGGATGGTGTCGTTGGGTTCAACGTCCAACGTAACTGT 387 Query 43077 TTTTCCGGTTAGAGTTTTCACAAA 43100 ||||| || | ||| ||||| || Sbjct 386 GTTTCCAGTCAAAGTCTTCACGAA 363 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/202 (69%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 42901 ACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCC 42960 |||||||| | ||||| |||||||| | |||||||| ||| || || ||| || Sbjct 922 ACCAAATGTAACGTGCTTTCCTTTTGGATGTTGTAATCACTCAAAGTGCGACTGTCTTCA 863 Query 42961 AATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG 43020 ||||| || || ||||| |||| || || || || | || | ||||||||| || | Sbjct 862 AATTGCTTTCCCGCAAAGATCAGACGTTGCTGTTCAGGAGGAATACCTTCTTTGTCTTGG 803 Query 43021 ATCAACTCTTTGAC--TCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTT 43078 ||| ||||||| | | | ||| ||| | || || || | ||| || |||| Sbjct 802 ATCTTTGCTTTGACGTTTTTGATAGTGTCTCGTTGGGTTCCACATCCAACGTAATGGTTT 743 Query 43079 TTCCGGTTAGAGTTTTCACAAA 43100 |||| || | |||||||||||| Sbjct 742 TTCCCGTCAAAGTTTTCACAAA 721 >seq19166 Length=5045 Score = 82.4 bits (90), Expect = 6e-11 Identities = 150/220 (68%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 ||| ||||||| | ||||||||| || | ||||| || ||||| | ||||| ||| Sbjct 4750 GCCACCACGCAAACGTAACACCAAGTGTAACGTGCTTTCTTTTTGAATGTTGTAGTCGCT 4809 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 || || | | | || ||||||||||| || |||||||||| || ||||| || | || Sbjct 4810 TAAAGTTCTTCCATCTTCCAATTGTTTTCCTGCAAAAATCAGGCGTTGTTGTTCAGGGGG 4869 Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061 | ||||| || || ||| | | ||||| | | ||||| | |||||| Sbjct 4870 GATTCCTTCCTTGTCTTGGATTTTCGCCTTGACATTTTGGATCGTGTCATTCGGCTCGAC 4929 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAA 43101 || | || || ||||| || || | ||| ||||| ||| Sbjct 4930 ATCCAAGGTAATGGTTTTGCCTGTCAAAGTCTTCACGAAA 4969 >seq11259 Length=23860 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 42898 AACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCG 42957 || |||||||| | ||| || || ||||| | ||||| || ||| ||||| | || Sbjct 23658 AAAACCAAATGCAAAGTACTTTCTTTTTGGATGTTGTAGTCACTCAAGGTACGGCCATCT 23717 Query 42958 TCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCG 43017 |||||||| || || || || ||||| || ||||| || | || | |||||| || || Sbjct 23718 TCCAATTGCTTTCCTGCGAAGATCAAACGTTGTTGCTCAGGGGGAATACCTTCCTTATCC 23777 Query 43018 CTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTT 43077 ||| |||| || | | |||||| || || || || | ||| || ||| Sbjct 23778 TGGATTTTGGCTTTCACATTTTGGATGGTGTCGTTAGGTTCCACATCCAACGTGATTGTT 23837 Query 43078 TTTCCGGTTAGAGTTTTCACAAA 43100 |||||||| | |||||| ||||| Sbjct 23838 TTTCCGGTCAAAGTTTTGACAAA 23860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381133442714922