Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq23974 89.7 8e-14 >seq23974 Length=7652 Score = 89.7 bits (98), Expect = 8e-14 Identities = 160/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 16472 GGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCT 16531 |||||||| || ||||| || || || ||||||| ||||||||||| || || | | Sbjct 4054 GGAATCACAAAACCAGCAATTCGACGATTGGCTCGCCGTGGTGGAGTTAAACGCATTAGT 3995 Query 16532 GGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCAT 16591 ||| ||||||| ||| | | ||| | || | ||| | | | ||||||| | Sbjct 3994 GGAACTATCTATGATGAGGCGAGAGGAGTTGTCAAAACCTTTTTAGAAAACGTTATCAAA 3935 Query 16592 GATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTC 16651 |||||| || ||||||||| | || | | || || || ||| | |||| | ||| Sbjct 3934 GATGCTGTCACATATACCGAGTATTCTCGAAGAAAAACGGTTACCGCTTTGGACGTTGTC 3875 Query 16652 TATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705 || || || ||||| ||||| | | || || || |||||| ||||| |||| Sbjct 3874 TACGCTTTAAAACGACAAGGAAGAACAATCTACGGATTTGGAGGTTAAATTTCT 3821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79028744975637