Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= NC_007804.2 Length=39104 Score E Sequences producing significant alignments: (Bits) Value seq16859 111 4e-20 >seq16859 Length=703 Score = 111 bits (122), Expect = 4e-20 Identities = 327/498 (66%), Gaps = 21/498 (4%) Strand=Plus/Minus Query 6502 GCAGGTCACCGATTCCGTTGGCATGCTGGAAACCTATGCTGAAGTCGATAAGTCACTGGC 6561 |||| ||||||| || |||||||| || |||||| | || |||| ||| | ||||| Sbjct 680 GCAGATCACCGACTCGTGCGGCATGCTCGAGACCTATTCGGAGATCGACAAGGCGCTGGC 621 Query 6562 TGATTTGAACGGCAATACCGCCGAATTC-CGCCTGTCTGAAGACCGCGCATTTATTGAAG 6620 || | |||||||| || || || || |||||||| || |||||||| || | || | Sbjct 620 CGACCTCAACGGCAACACGGC-GACTTATCGCCTGTCCGAGGACCGCGCCTTCCTCGAGG 562 Query 6621 CGATGAATCAGCAGATGGCGCAGACGCTGTTTTATGGTGATTCCAGCGTT-AACCCTCAG 6679 | ||| |||||| | || | |||||| || || | || ||| || || | Sbjct 561 GGCTGACGCAGCAGCTCGCCGGGGTGCTGTTCTACGGCAACACC-GCGACCAATCCCGAA 503 Query 6680 CAGTTTATGGGACTGTCCTCCCGCTATTCCA----------GTCTGTCTGCGGGTAATGC 6729 | || ||||| | | | ||||| || ||| | | || | || Sbjct 502 CGCTTCATGGGGTTCGCGCCGCGCTACAACACGACCTCGACGTC-GACGTCGCAGACCGC 444 Query 6730 TCAGAACATCATTGATGCTGGTGGCACGGGTACAGATAACACCTCAATCTGGTTAGTGGT 6789 | ||| |||| | | || || |||| | || ||||| || |||||| | || | Sbjct 443 CAACAACTTCATCGCGGGCGGCGGTTCGGGCTCCGACAACACGTCGATCTGGCTGGTCGG 384 Query 6790 GTGGGGCGAAAACACCGTGCATGGCATCTTCCCGAAAGGGAAGAAGGCTGGCATCCAGAT 6849 |||||||| |||||||| ||||||||||| || || | ||||| || | ||| Sbjct 383 CTGGGGCGATCTTACCGTGCACGGCATCTTCCCCAAGGGCAGCAAGGCCGGGCTGTCGAT 324 Query 6850 GGAAGATAAAGGCCAGGTGACACTGGAAGATGCTAATGGCGGCAA---GTACGAAGGCTA 6906 | |||| ||| || ||| ||| || || | |||||| ||| | ||||| Sbjct 323 GAAAGACCTCGGCGAGCAGACGCTGCTCGACGC---GGCCGGCAATCGCTACCAGGGCTA 267 Query 6907 TCGCACCCATTACAAATGGGACAACGGACTTGCTCTGCGTGACTGGCGTTATGTTGTTCG 6966 |||||||| ||||| |||||| ||| || | |||| || ||||| ||||| || || Sbjct 266 CCGCACCCACTACAAGTGGGACGCCGGCCTCACGGTGCGCGATTGGCGCTATGTCGTGCG 207 Query 6967 CATTGCAAACATCGATGT 6984 ||| | |||||||| || Sbjct 206 CATCGGCAACATCGACGT 189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124935773633028