Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq12740 91.5 2e-13 seq146 89.7 6e-13 seq7650 84.2 3e-11 >seq12740 Length=3241 Score = 91.5 bits (100), Expect = 2e-13 Identities = 211/308 (69%), Gaps = 15/308 (5%) Strand=Plus/Minus Query 10853 ACAACGATGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAG-AGTTGATTGATGGT 10911 ||||| ||||| | || | | || |||||||| || |||| | ||| || | || Sbjct 2750 ACAACAATGCCGCTGTCACTTTTGAACCCATCCATTTCTA-CAAGCAATTGGTTCAATGT 2692 Query 10912 TTGTTCGCGTTCATCATT--CGCGGGCATACCACCC----GCACTGCGTTGCTTACCGAC 10965 | ||||||||| || || | | ||| | | ||| |||| || |||| | ||||| Sbjct 2691 GTTTTCGCGTTCGTCGTTGCCCCCTGCAAAGCCCCCTTTGGCAC-GC-TTGCGT-CCGAC 2635 Query 10966 GGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCACGGGCAACTTCAAAGAT 11025 || || ||||| |||||||| | |||||||||| |||| || || ||||||| | Sbjct 2634 CGCATCGATTTCGTCGATGAATATGATACACGGTGCGTTTTTTCGAGCCTCTTCAAACAA 2575 Query 11026 ATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAAT--TGGCGGCGGAA 11083 | || || | | || |||||| || ||||||||||||||||||| || || || Sbjct 2574 GTTGCGCACGCGCGAGGGACCGACGCCGACAAACATTTCCACAAAATCACTGCCGCTGAT 2515 Query 11084 CATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCC 11143 | || ||| | || | ||| || || | ||| || ||||| | ||| || ||| Sbjct 2514 ACT--GAAGAACACGCAGTCCGCTTCTCCTGCCACGGCACGTGCGAGCAAGGTTTTGCCC 2457 Query 11144 GTCCCAGG 11151 |||||||| Sbjct 2456 GTCCCAGG 2449 >seq146 Length=10098 Score = 89.7 bits (98), Expect = 6e-13 Identities = 202/301 (67%), Gaps = 2/301 (1%) Strand=Plus/Plus Query 114274 CAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT 114333 || ||| || ||||| || | || || ||||| | ||||||||| || ||| ||| ||| Sbjct 8990 CAGAATGAACACATCGGCCAAGCCCTGCACACCAATGCCAATTGGTCGGTGTTTCAAATT 9049 Query 114334 AGACTT-TCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTT 114392 ||| ||| | | || ||||||||||| ||| || || || | || | || | Sbjct 9050 GGACACCTCGGCCTCTTTC-ACGGGATAAAAGTTCACGTCAATCACTTTGTTCAAGTTCT 9108 Query 114393 TGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT 114452 | || || || || || | ||| || || || | || || ||||| ||| | ||| Sbjct 9109 TTGTCACTACTTTGGTCACTTCGACCAGTTTCTCCAAGTCGAACTTGCGACTCTTTGCAT 9168 Query 114453 TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAG 114512 ||| | ||||| || || || ||||||| || ||||| | | || || | | Sbjct 9169 CCACAAATTTAGGCAGAGCAATCGACGCCAAGTTGCACACCGCGACTTCGTCTGGAGATG 9228 Query 114513 TGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGAT 114572 ||||||| | || || || ||||| || || ||| || || |||||||| ||||| | Sbjct 9229 TGTACTCCACTATCTCGGTGCACAAGTTCGATGACTTTATCGTACCCAAGTTTTTTTGGT 9288 Query 114573 T 114573 | Sbjct 9289 T 9289 >seq7650 Length=7814 Score = 84.2 bits (92), Expect = 3e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 113912 ACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCAC 113971 |||||||| || || | ||||| | || || | |||| |||||||||| ||||||||| Sbjct 2263 ACAAACTCGCCTGCCAAAGTGCGACGCACGTATACATTGCTCGTGTATGGTTCAAAGCAC 2322 Query 113972 TCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCA 114020 || || || ||||| ||||| ||| || ||||| ||||| || |||| Sbjct 2323 TCGTTATTTCCCAATATTTGACTGGTCGACGCTGTTGGCATTGGCGCCA 2371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596974213261720