Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq7650 102 1e-16 >seq7650 Length=7814 Score = 102 bits (112), Expect = 1e-16 Identities = 131/178 (74%), Gaps = 2/178 (1%) Strand=Plus/Plus Query 203884 CAGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAG 203943 |||||| ||||| || || || || ||||| | ||| || || | ||||||||| |||| Sbjct 1950 CAGATAATACATTCCCGTTTTAAGTCCCTTTTCCCAGCCATAAAAGTGCATGGACGACAA 2009 Query 203944 TTTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGG 204003 ||| | | |||| | | |||||| |||||||| || || ||| || || ||| | Sbjct 2010 TTTACCAAAATTGGCGCCCATCATGTGTATGTTCAGCGATTGAGATTGATCAAT-AAACG 2068 Query 204004 CGCC-CGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060 | || ||||| || ||||||| || || || || || ||||| ||||||||||| || Sbjct 2069 CTCCGCGATCGGCAGCCATATCAATGATTGTTTTTTGAGAAATTTCCCACACCGTTTT 2126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794650186993040