Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq45884 122 2e-22 seq49792 120 7e-22 seq19824 116 9e-21 seq11259 116 9e-21 seq41098 114 3e-20 seq35349 111 4e-19 seq35091 107 5e-18 seq32733 107 5e-18 seq45910 104 6e-17 seq40549 102 2e-16 seq36324 100 7e-16 seq29189 93.3 1e-13 seq19397 93.3 1e-13 seq48569 91.5 3e-13 seq38859 89.7 1e-12 seq27925 89.7 1e-12 seq24352 89.7 1e-12 seq1246 89.7 1e-12 seq48206 86.0 1e-11 seq23482 86.0 1e-11 seq2860 86.0 1e-11 >seq45884 Length=997 Score = 122 bits (134), Expect = 2e-22 Identities = 139/184 (76%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 |||||||||| |||||| ||| |||||| | | ||||| | |||||||| || ||| Sbjct 904 TCCTTTTGGATGTTGTAATCACTCAAAGTGCGACTGTCTTCAAATTGCTTTCCCGCAAAG 845 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGAT 199558 || ||||| ||||| || ||| ||| |||||| || || |||||| || ||| | Sbjct 844 ATCAGACGTTGCTGTTCAGGAGGAATACCTTCTTTGTCTTGGATCTTTGCTTTGACGTTT 785 Query 199559 TCGACGGTGTCT-GTTGT-TTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCA 199616 | || |||||| |||| ||| ||||||||||| || || || ||||| | |||||||| Sbjct 784 TTGATAGTGTCTCGTTGGGTTCCACATCCAACGTAATGGTTTTTCCCGTCAAAGTTTTCA 725 Query 199617 CAAA 199620 |||| Sbjct 724 CAAA 721 >seq49792 Length=5355 Score = 120 bits (132), Expect = 7e-22 Identities = 138/183 (75%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 || ||||||| ||| || || ||| |||||||||||||||| ||||||||||| ||| Sbjct 732 TCTTTTTGGATGTTATAATCGCTCAAGGTCCTTCCATCTTCCAATTGCTTTCCGGCAAAG 673 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT-CACGGA 199557 || || || || || || ||| ||| ||||| ||||| || ||| |||| |||| Sbjct 672 ATCAGTCGTTGTTGCTCTGGAGGAATGCCTTCCTTGTCCTGGAT-TTTGGCTTTCACGTT 614 Query 199558 TTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 || || ||||| | | ||| |||||||||||||| || || || || | ||||||||| Sbjct 613 TTGGATCGTGTCGTTGGGTTCAACATCCAACGTGATTGTTTTCCCAGTTAAAGTTTTCAC 554 Query 199618 AAA 199620 || Sbjct 553 GAA 551 Score = 89.7 bits (98), Expect = 1e-12 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 |||||||||| |||||| || |||||| ||||||||||||| ||| ||||| || ||| Sbjct 414 TCCTTTTGGATGTTGTAATCGCTCAAAGTTCTTCCATCTTCCAACTGTTTTCCAGCAAAG 355 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGAT 199558 || | || || || || || ||| ||||| || || |||||| ||| ||| | Sbjct 354 ATTAATCGTTGTTGCTCTGGTGGAATGCCTTCCTTGTCTTGGATCTTTGCCTTAACGTTT 295 Query 199559 TCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACA 199618 | || || || | | || || || || || || || || ||||| | || |||||| Sbjct 294 TGGATTGTATCATTGGGCTCAACGTCTAAGGTTATGGTTTTGCCCGTCAATGTCTTCACA 235 Query 199619 AA 199620 || Sbjct 234 AA 233 >seq19824 Length=8713 Score = 116 bits (128), Expect = 9e-21 Identities = 137/183 (75%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 |||||||||| ||| ||||| |||||| | || ||||||| |||||||| || ||| Sbjct 7198 TCCTTTTGGATGTTATAGTCGCTCAAAGTGCGACCGTCTTCCAATTGCTTTCCTGCAAAG 7257 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT-CACGGA 199557 || ||||| || || || ||| |||||| ||| |||||||| ||| |||| |||| Sbjct 7258 ATCAGACGTTGTTGCTCTGGAGGAATTCCCTCTTTATCCTGAAT-TTTGGCTTTCACGTT 7316 Query 199558 TTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 || || || || | | ||| ||||||||||| || || || || || | ||| ||||| Sbjct 7317 TTGGATTGTATCGTTGGGTTCCACATCCAACGTAATGGTTTTTCCGGTTAAAGTCTTCAC 7376 Query 199618 AAA 199620 ||| Sbjct 7377 AAA 7379 Score = 105 bits (116), Expect = 2e-17 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 || ||||||| ||||||||| |||||| |||||||| || | || || ||||| ||| Sbjct 6369 TCTTTTTGGATGTTGTAGTCGCTCAAAGTTCTTCCATCCTCTAATTGTTTGCCGGCAAAG 6428 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGAT 199558 |||||||| || || || || ||| ||||| ||||| || || ||| || | Sbjct 6429 ATGAGACGTTGTTGCTCAGGCGGAATACCTTCCTTGTCCTGGATTTTCGCCTTGACATTT 6488 Query 199559 TCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACA 199618 | || |||||| | | ||| || |||||||| || || || || || | ||||| ||| Sbjct 6489 TGGATGGTGTCGTTGGGTTCCACGTCCAACGTAATGGTTTTTCCGGTCAAGGTTTTAACA 6548 Query 199619 AAAATTTG 199626 || ||||| Sbjct 6549 AAGATTTG 6556 Score = 89.7 bits (98), Expect = 1e-12 Identities = 131/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 |||||||||| ||| || || |||||| | ||||| |||| ||||| ||||||||| Sbjct 6895 TCCTTTTGGATGTTATAATCGCTCAAAGTGCGGCCATCCTCCAATTGCTTGCCGGCGAAG 6954 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGC-TTCACGGA 199557 || | ||| || || || || |||||||| || ||||| ||| || |||||| Sbjct 6955 ATCAAACGTTGTTGCTCAGGGGGGATTCCTTCCTTATCTTGAAT-TTTGGCTTTCACGTT 7013 Query 199558 TTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 || || || || | | ||| ||||||||||| || || || || || | || || || Sbjct 7014 TTGGATTGTATCGTTGGGTTCCACATCCAACGTAATGGTTTTTCCGGTCAATGTCTTGAC 7073 Query 199618 AAA 199620 ||| Sbjct 7074 AAA 7076 >seq11259 Length=23860 Score = 116 bits (128), Expect = 9e-21 Identities = 137/183 (75%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 || ||||||| |||||||||| ||| || | |||||||||| |||||||| |||||| Sbjct 23679 TCTTTTTGGATGTTGTAGTCACTCAAGGTACGGCCATCTTCCAATTGCTTTCCTGCGAAG 23738 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT-CACGGA 199557 || | ||| || || || || ||| ||||| ||||| || ||| |||| ||| Sbjct 23739 ATCAAACGTTGTTGCTCAGGGGGAATACCTTCCTTATCCTGGAT-TTTGGCTTTCACATT 23797 Query 199558 TTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 || || |||||| | | ||| |||||||||||||| || || || || | |||||| || Sbjct 23798 TTGGATGGTGTCGTTAGGTTCCACATCCAACGTGATTGTTTTTCCGGTCAAAGTTTTGAC 23857 Query 199618 AAA 199620 ||| Sbjct 23858 AAA 23860 >seq41098 Length=1582 Score = 114 bits (126), Expect = 3e-20 Identities = 136/183 (74%), Gaps = 1/183 (1%) Strand=Plus/Minus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 |||||||||| |||||| ||| |||||| | || ||||||| |||||||| || ||| Sbjct 774 TCCTTTTGGATGTTGTAATCACTCAAAGTACGGCCGTCTTCCAATTGCTTTCCCGCAAAG 715 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGAT 199558 || ||||| ||||| || || ||| |||||| || || |||||| || ||| | Sbjct 714 ATCAGACGTTGCTGTTCATGAGGAATACCTTCTTTGTCTTGGATCTTTGCTTTGACGTTT 655 Query 199559 TCGACGGTGTCTGTTGT-TTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 | || ||| |||| ||| ||||||||||| || || || |||| | ||||||||| Sbjct 654 TGGATAGTGCTCGTTGGATTCCACATCCAACGTAATGGTTTTTACCGTCAAAGTTTTCAC 595 Query 199618 AAA 199620 ||| Sbjct 594 AAA 592 Score = 84.2 bits (92), Expect = 5e-11 Identities = 130/183 (71%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 || ||||| | ||| || ||| |||||| | || || |||| || || || || ||| Sbjct 416 TCTTTTTGAATGTTATAATCACTCAAAGTACGGCCGTCCTCCAATTGTTTGCCAGCAAAG 357 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT-CACGGA 199557 || | ||| || || || || ||| ||||| |||||||| ||| |||| |||| Sbjct 356 ATCAAACGTTGTTGCTCATGAGGAATGCCTTCATTATCCTGAAT-TTTGGCTTTCACGTT 298 Query 199558 TTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 || || |||||| | | ||| ||||||||||||||| | || | || | ||||||| Sbjct 297 TTGGATGGTGTCGTTGGGTTCCACATCCAACGTGATCATTTTTCAGGTTAAGATTTTCAC 238 Query 199618 AAA 199620 ||| Sbjct 237 AAA 235 >seq35349 Length=2359 Score = 111 bits (122), Expect = 4e-19 Identities = 136/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 |||||||||| |||||| ||| |||||| | || ||||| | |||||| | || ||| Sbjct 1114 TCCTTTTGGATGTTGTAATCACTCAAAGTGCGGCCGTCTTCAAATTGCTTTTCCGCAAAG 1055 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC-ACGGA 199557 || ||||| ||||| || ||| ||| |||||| || || || |||||||| ||| Sbjct 1054 ATCAGACGTTGCTGTTCAGGAGGAATACCTTCTTTGTCTTGGAT-TTTTGCTTTGACGTT 996 Query 199558 TTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 || || ||||| | | ||| ||||||||||| || || || | ||| | ||| ||||| Sbjct 995 TTGGATAGTGTCGTTGGGTTCAACATCCAACGTAATGGTTTTTCTCGTCAAAGTCTTCAC 936 Query 199618 AAA 199620 ||| Sbjct 935 AAA 933 Score = 96.9 bits (106), Expect = 8e-15 Identities = 133/183 (73%), Gaps = 5/183 (3%) Strand=Plus/Minus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 || ||||||| ||| || ||| |||||| | ||||| |||| || || ||||| ||| Sbjct 412 TCTTTTTGGATGTTATAATCACTCAAAGTACGGCCATCCTCCAATTGTTTGCCGGCAAAG 353 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT-CACGGA 199557 || | ||| || || || ||| ||| ||||| |||||||| | |||| |||| Sbjct 352 ATCAAACGTTGTTGTTCAGGAGGAATGCCTTCATTGTCCTGAAT---TGGCTTTCACGTT 296 Query 199558 TTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 || || ||||| | | ||| |||||||||||||| || || || || | || |||||| Sbjct 295 TTAGATAGTGTCGTTGGGTTCCACATCCAACGTGATAGTTTTTCCTGTTA-AGGTTTCAC 237 Query 199618 AAA 199620 ||| Sbjct 236 AAA 234 >seq35091 Length=3122 Score = 107 bits (118), Expect = 5e-18 Identities = 135/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 || ||||||| ||| |||||| ||| |||||||||||||| | || |||||||| ||| Sbjct 937 TCTTTTTGGATGTTATAGTCACTCAAGGTCCTTCCATCTTCTAATTGTTTTCCGGCAAAG 878 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT-CACGGA 199557 || | || ||||| || ||| ||| ||||| || || || ||| |||| ||| Sbjct 877 ATTAATCGTTGCTGTTCTGGAGGAATGCCTTCCTTGTCTTGGAT-TTTGGCTTTCACATT 819 Query 199558 TTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 || || ||||| | | || || ||||| ||||| || || || || ||||||||||| Sbjct 818 TTGGATCGTGTCATTGGGCTCAACGTCCAATGTGATTGTTTTCCCAGTTAGAGTTTTCAC 759 Query 199618 AAA 199620 ||| Sbjct 758 AAA 756 Score = 89.7 bits (98), Expect = 1e-12 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 |||||||||| |||||| || ||| || ||||||||||||| |||||||| || ||| Sbjct 616 TCCTTTTGGATGTTGTAATCGCTCAAGGTTCTTCCATCTTCCAATTGCTTTCCAGCAAAG 557 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGAT 199558 || | ||||| || || || ||| ||||| || || |||||| ||| ||| | Sbjct 556 ATTAAGCGCTGTTGCTCTGGTGGAATACCTTCCTTGTCTTGGATCTTTGCCTTGACGTTT 497 Query 199559 TCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACA 199618 | || ||||| | | || || || || || || || ||||| || | || ||||| Sbjct 496 TGGATCGTGTCATTGGGCTCAACGTCTAAGGTAATGGTTTTACCAGTCAAGGTCTTCACG 437 Query 199619 AA 199620 || Sbjct 436 AA 435 >seq32733 Length=1362 Score = 107 bits (118), Expect = 5e-18 Identities = 143/195 (73%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 199441 CTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGAT 199500 |||||| | ||| || || |||||| | || ||||||| ||||| | ||| ||||| Sbjct 233 CTTTTGAATGTTATAATCGCTCAAAGTTCGGCCGTCTTCCAATTGCTTGCAGGCAAAGAT 174 Query 199501 GAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC-ACGGATT 199559 | | | || || || || ||||||||| |||||||| |||||||| ||| || Sbjct 173 CAAATGTTGTTGCTCTGGGGGAATTCCTTCATTGTCCTGAAT-TTTTGCTTTGACGTTTT 115 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 || |||||| | | || |||||||||||||| || || ||||| | ||||||||||| Sbjct 114 GGATGGTGTCATTGGGCTCCACATCCAACGTGATGGTTTTTCCCGTCAAAGTTTTCACAA 55 Query 199620 AA--ATTTGGTACAT 199632 || |||| || ||| Sbjct 54 AACTATTTTGTTCAT 40 Score = 95.1 bits (104), Expect = 3e-14 Identities = 133/183 (73%), Gaps = 3/183 (2%) Strand=Plus/Minus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 |||||||||| |||||| ||| |||||| | || ||||||| | ||||| || ||| Sbjct 593 TCCTTTTGGATGTTGTAATCACTCAAAGTACAGCCTTCTTCCAATTTCTTTCACGCAAAG 534 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC-ACGGA 199557 || ||||| ||||| || || ||| ||| | | || || || |||||||| ||| Sbjct 533 ATCAGACGTTGCTGTTCATGAGGAATACCTCTTTG-TCTTGGAT-TTTTGCTTTGACGTT 476 Query 199558 TTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 || || ||||| | | ||| ||||||||||| || || || | | | | ||| ||||| Sbjct 475 TTGGATAGTGTCGTTGGGTTCCACATCCAACGTAATGGTTTTTCTCCTCAAAGTCTTCAC 416 Query 199618 AAA 199620 ||| Sbjct 415 AAA 413 >seq45910 Length=1805 Score = 104 bits (114), Expect = 6e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 || ||||| | ||| || ||| ||| |||||||||||||| | || ||||| || ||| Sbjct 310 TCTTTTTGAATGTTATAATCACTCAAGGTCCTTCCATCTTCTAATTGTTTTCCAGCAAAG 251 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGAT 199558 || || || ||||| || ||| ||| ||||| || || ||||| ||||| | Sbjct 250 ATTAGTCGTTGCTGTTCTGGAGGAATGCCTTCCTTGTCTTGGATCTTGGCTTTCACATTT 191 Query 199559 TCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACA 199618 | || ||||| | | ||| |||||||| ||||| || || || || || ||||||||| Sbjct 190 TGGATCGTGTCATTGGGTTCAACATCCAATGTGATTGTTTTCCCAGTTAGGGTTTTCACA 131 Query 199619 AA 199620 || Sbjct 130 AA 129 >seq40549 Length=748 Score = 102 bits (112), Expect = 2e-16 Identities = 134/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 |||||||| | ||||||||| ||| || | || ||||||| ||||| || ||||| Sbjct 319 TCCTTTTGAATGTTGTAGTCGCTCAATGTGCGACCGTCTTCCAATTGCTTGCCAGCGAAA 260 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCA-CGGA 199557 || | ||||| || || ||| ||| |||||| |||||||| ||| |||| | | Sbjct 259 ATCAATCGCTGTTGCTCAGGAGGAATGCCTTCTTTATCCTGAAT-TTTGGCTTTAACATT 201 Query 199558 TTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 || || || || | | ||||| |||||||||||||||||||| || | |||||||| Sbjct 200 TTGGATAGTATCGTTGGGCTCTACGTCCAACGTGATCGTCTTACCGGTCAAGGTTTTCAC 141 Query 199618 AAA 199620 || Sbjct 140 GAA 138 >seq36324 Length=413 Score = 100 bits (110), Expect = 7e-16 Identities = 133/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 199443 TTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGA 199502 |||||| ||| |||||| ||| |||||||||||||| | || ||||||| ||||| | Sbjct 413 TTTGGATGTTATAGTCACTCAAGGTCCTTCCATCTTCTAATTGTCTTCCGGCAAAGATTA 354 Query 199503 GACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT-CACGGATTCG 199561 || || || || ||| ||| ||||| || || || ||| |||| ||| || | Sbjct 353 ATCGTTGTTGTTCTGGAGGAATGCCTTCATTGTCTTGGAT-TTTGGCTTTCACATTTTGG 295 Query 199562 ACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAA 199621 | ||||| | | ||| || ||||| |||||||| || || || || ||||||||||| Sbjct 294 ATCGTGTCATTGGGTTCAACGTCCAATGTGATCGTTTTCCCAGTTAGGGTTTTCACAAAG 235 Query 199622 AT 199623 || Sbjct 234 AT 233 >seq29189 Length=1803 Score = 93.3 bits (102), Expect = 1e-13 Identities = 132/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 || ||||||| |||||||||| ||| || | | |||||| | ||||| || || ||| Sbjct 562 TCTTTTTGGATGTTGTAGTCACTCAAGGTGCGACAATCTTCTAATTGCTTGCCTGCAAAG 621 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT-CACGGA 199557 || | || || || || ||| ||| ||||| |||||||| ||| |||| || Sbjct 622 ATCAATCGTTGTTGTTCGGGAGGAATGCCTTCATTATCCTGAAT-TTTGGCTTTCAAATT 680 Query 199558 TTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 || || |||||| | | || |||||||||||||| || || || || | |||||| || Sbjct 681 TTGGATGGTGTCATTAGGCTCCACATCCAACGTGATGGTTTTTCCGGTCAAAGTTTTGAC 740 Query 199618 AAA 199620 ||| Sbjct 741 AAA 743 >seq19397 Length=4183 Score = 93.3 bits (102), Expect = 1e-13 Identities = 132/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 || ||||||| |||||| || |||||| | || || |||| ||||| ||||| ||| Sbjct 4081 TCTTTTTGGATGTTGTAATCGCTCAAAGTTCGGCCGTCCTCCAATTGCTTGCCGGCAAAG 4022 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC-ACGGA 199557 || | ||| || || || || ||||||||| |||||||| ||| |||| ||| Sbjct 4021 ATCAAACGTTGTTGCTCAGGGGGAATTCCTTCCTTGTCCTGAAT-TTTCGCTTTGACGTT 3963 Query 199558 TTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 || || |||||| | | || ||||||||||| || || || || || | ||| ||||| Sbjct 3962 TTGGATGGTGTCGTTGGGCTCAACATCCAACGTAATTGTTTTTCCAGTCAAAGTCTTCAC 3903 Query 199618 AAA 199620 || Sbjct 3902 GAA 3900 Score = 84.2 bits (92), Expect = 5e-11 Identities = 130/183 (71%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 || ||||||| ||| ||||| || || | |||||||| | |||||||| || ||| Sbjct 3789 TCTTTTTGGATGTTATAGTCGCTCAGGGTGCGGCCATCTTCTAATTGCTTTCCTGCAAAG 3730 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT-CACGGA 199557 || | || || || || || || ||||| ||||| || ||| |||| |||| Sbjct 3729 ATCAATCGTTGTTGCTCAGGGGGGATACCTTCCTTATCCTGGAT-TTTGGCTTTCACGTT 3671 Query 199558 TTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 || || |||||| | | || |||||||||||||| || || || || | |||||| || Sbjct 3670 TTGGATGGTGTCATTGGGCTCCACATCCAACGTGATTGTTTTTCCAGTCAAAGTTTTGAC 3611 Query 199618 AAA 199620 ||| Sbjct 3610 AAA 3608 >seq48569 Length=404 Score = 91.5 bits (100), Expect = 3e-13 Identities = 132/184 (72%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 |||||||||| ||| || || || || | ||||| |||| ||||| ||||| ||| Sbjct 263 TCCTTTTGGATGTTATAATCGATCAGGGTGCAGCCATCCTCCAATTGCTTGCCGGCAAAG 204 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT-CACGGA 199557 || | ||||| || || ||| ||| |||| ||||| || ||| |||| |||| Sbjct 203 ATTAATCGCTGTTGCTCAGGAGGAATACCTTACTTATCCTGGAT-TTTGGCTTTCACGTT 145 Query 199558 TTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 || || ||||| | | || |||||||||||||| || || || || | ||||||||| Sbjct 144 TTGGATAGTGTCATTGGGCTCCACATCCAACGTGATGGTTTTTCCAGTCAAAGTTTTCAC 85 Query 199618 AAAA 199621 ||| Sbjct 84 GAAA 81 >seq38859 Length=993 Score = 89.7 bits (98), Expect = 1e-12 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 |||||||||| ||||| ||| ||| || ||||||||||||| |||||||| || ||| Sbjct 814 TCCTTTTGGATATTGTAATCACTCAAGGTTCTTCCATCTTCCAATTGCTTTCCAGCAAAG 755 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGAT 199558 || | ||||| || || || ||| ||||| || || |||||| ||| ||| | Sbjct 754 ATTAAGCGCTGTTGCTCTGGTGGAATACCTTCCTTGTCTTGGATCTTTGCCTTGACGTTT 695 Query 199559 TCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACA 199618 | || ||||| | | || || || || || || || || || || || || ||||| Sbjct 694 TGGATCGTGTCATTGGGCTCAACGTCTAAGGTAATGGTTTTGCCGGTCAGGGTCTTCACG 635 Query 199619 AA 199620 || Sbjct 634 AA 633 >seq27925 Length=8008 Score = 89.7 bits (98), Expect = 1e-12 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 |||||||||| |||||| ||| ||| || | ||||| |||| ||||||||||| ||| Sbjct 7891 TCCTTTTGGATGTTGTAATCACTCAAGGTTCGACCATCCTCCAATTGCTTTCCGGCAAAG 7832 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGAT 199558 || | || ||||| || || ||| ||||| || || || || ||||||| Sbjct 7831 ATCAATCGTTGCTGCTCTGGTGGAATGCCTTCCTTGTCTTGGATTTTGGCCTTCACGTTC 7772 Query 199559 TCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACA 199618 | || ||||| | | || || ||||||||||| || || || || | |||||||| Sbjct 7771 TGGATCGTGTCGTTGGCCTCGACGTCCAACGTGATTGTTTTTCCAGTTAAGGTTTTCACG 7712 Query 199619 AA 199620 || Sbjct 7711 AA 7710 >seq24352 Length=2092 Score = 89.7 bits (98), Expect = 1e-12 Identities = 131/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 |||||||||| |||||| || |||||| || | ||| | |||||||| | ||| Sbjct 340 TCCTTTTGGATGTTGTAATCGCTCAAAGTGTGGCCGTTTTCTAATTGCTTTCCAACAAAG 281 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCA-CGGA 199557 || | ||| ||||| || |||| ||| |||||| || || || ||| |||| | || Sbjct 280 ATCAAACGTTGCTGTTCAGGAAGAATACCTTCTTTGTCTTGGAT-TTTAGCTTTAACGTT 222 Query 199558 TTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 || || || || | | ||| |||||||||||||| || || || || | ||||| || Sbjct 221 TTGGATCGTATCATTAGGTTCCACATCCAACGTGATGGTTTTTCCAGTTAAGGTTTTAAC 162 Query 199618 AAA 199620 ||| Sbjct 161 AAA 159 >seq1246 Length=3490 Score = 89.7 bits (98), Expect = 1e-12 Identities = 131/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 |||||||| | |||||||||| ||| || | || ||||||| | ||| | ||||| Sbjct 249 TCCTTTTGAATGTTGTAGTCACTCAAGGTGCGGCCGTCTTCCAATT-CTTGCTAGCGAAA 191 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGAT 199558 || | ||||| || || || ||| ||||||| ||||| ||||| ||| || | Sbjct 190 ATCAACCGCTGTTGCTCTGGGAAA-TTCCTTCCTTGTCCTGGATCTTGGCCTTAACATTT 132 Query 199559 TCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACA 199618 | || || || ||| ||||||||||||||||| ||||| || || | ||||| || Sbjct 131 TGGATAGTATCGTTTGGCTCTACATCCAACGTGATTGTCTTGCCAGTCAAGGTTTTAACG 72 Query 199619 AAA 199621 ||| Sbjct 71 AAA 69 >seq48206 Length=408 Score = 86.0 bits (94), Expect = 1e-11 Identities = 113/154 (73%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 |||||||||||| | || |||||||| ||||| | || || || || ||| ||| || Sbjct 176 CCTTCCATCTTCTAATTGTTTTCCGGCAAAGATCAATCGTTGTTGTTCTGGAGGAATGCC 235 Query 199528 TTCTCGCTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCA 199586 ||| || ||||| ||| || ||||| || || ||||| | | ||| || |||| Sbjct 236 TTCCTTGTCTTGAAT-TTTGGCTTTCACATTTTGGATCGTGTCATTGGGTTCAACGTCCA 294 Query 199587 ACGTGATCGTCTTACCCGTGAGAGTTTTCACAAA 199620 | |||||||| || || || || ||||||||||| Sbjct 295 ATGTGATCGTTTTCCCAGTTAGGGTTTTCACAAA 328 >seq23482 Length=3631 Score = 86.0 bits (94), Expect = 1e-11 Identities = 129/181 (71%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 199442 TTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATG 199501 ||||||| ||| || || ||| || ||||||||||| | || || ||||| || || Sbjct 817 TTTTGGATGTTATAATCGCTCAATGTTCTTCCATCTTCTAATTGTTTGCCGGCAAATATC 758 Query 199502 AGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCA-CGGATTC 199560 | ||| || || || ||| ||||||||| |||||||| ||| |||| | || || Sbjct 757 AAACGTTGTTGTTCAGGAGGGATTCCTTCTTTGTCCTGAAT-TTTGGCTTTAACGTTTTG 699 Query 199561 GACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAAA 199620 || ||||| | | || || || | || || ||||||||||| | |||||||| || Sbjct 698 GATTGTGTCGTTGGGCTCGACGTCAAGGGTAATTGTCTTACCCGTTAATGTTTTCACGAA 639 Query 199621 A 199621 | Sbjct 638 A 638 >seq2860 Length=5989 Score = 86.0 bits (94), Expect = 1e-11 Identities = 133/185 (72%), Gaps = 4/185 (2%) Strand=Plus/Minus Query 199439 TCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 |||||||||| || || ||| || || | |||||||||| |||||||| || ||| Sbjct 1683 TCCTTTTGGATATTATAATCACTTAAGGTGCGGCCATCTTCCAATTGCTTTCCAGCAAAG 1624 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT-CACGGA 199557 || | || || | || || ||| |||| | |||||| ||| |||| ||| Sbjct 1623 ATCAATCGTTGTTACTCATGAGGAATGCCTTAATTATACTGAAT-TTTGGCTTTCACATT 1565 Query 199558 TTCGACGGTGTCTGTTGT-TTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCA 199616 || || ||| || ||||| ||| |||||||||||||| || || || || | ||||||| Sbjct 1564 TTGGATGGTATC-GTTGTGTTCCACATCCAACGTGATGGTTTTTCCAGTTAAGGTTTTCA 1506 Query 199617 CAAAA 199621 ||||| Sbjct 1505 CAAAA 1501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178154133459203