Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= NC_014636.1 Length=225268 Score E Sequences producing significant alignments: (Bits) Value seq18466 87.8 3e-12 seq7491 87.8 3e-12 >seq18466 Length=596 Score = 87.8 bits (96), Expect = 3e-12 Identities = 71/85 (84%), Gaps = 1/85 (1%) Strand=Plus/Plus Query 189963 TGGTGCGGATGGTCGGACTCGAACCGACACGCCTAT-GGCGCTAGAACCTAAATCTAGTG 190021 |||||||| ||| ||||| ||||| ||||||| ||||| ||||||||||||| ||| Sbjct 39 TGGTGCGGGTGGAGGGACTTGAACCCCCACGCCTTGCGGCGCCAGAACCTAAATCTGGTG 98 Query 190022 CGTCTGCCAATTTCGCCACATCCGC 190046 ||||| ||| |||||||||| |||| Sbjct 99 CGTCTACCAGTTTCGCCACACCCGC 123 >seq7491 Length=1829 Score = 87.8 bits (96), Expect = 3e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 191862 TGGTGCGCCGTGATGGACTCGAACCATCGACCCTCGGATTAAAAGTCCGATGCTCTACCA 191921 |||| |||||| ||||||||||| ||||| ||||||||||||||| |||||||||| Sbjct 55 TGGTAGGCCGTGCGGGACTCGAACCTGCGACCAACGGATTAAAAGTCCGCTGCTCTACCA 114 Query 191922 ACTAAGCTAACGGCGCGT 191939 ||| |||||||| | ||| Sbjct 115 ACTGAGCTAACGACCCGT 132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 720271855621920