Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= NC_015265.1 Length=37236 Score E Sequences producing significant alignments: (Bits) Value seq31095 176 1e-39 seq11070 150 4e-32 >seq31095 Length=655 Score = 176 bits (194), Expect = 1e-39 Identities = 324/467 (69%), Gaps = 6/467 (1%) Strand=Plus/Minus Query 9179 GGTGATCGGGCCGTATTACCCGAAGGGCGAGCGTGGCCGGCCGCCGATTGGCCTGGAACG 9238 |||||| | |||| | ||||| |||| | |||||| ||||| ||||||||||| || Sbjct 476 GGTGATAGAGCCGCACTACCCCAAGGCAGGCAATGGCCGCCCGCCCATTGGCCTGGAGCG 417 Query 9239 GATGCTGCGGATCTACTTGCTGCAGCAGTGGTACGGGTTGTCGGACGAAGGGCTTGAAGA 9298 ||||||||| ||| | || ||||| || |||| | || | || | | || || Sbjct 416 GATGCTGCGCATCCATTTCCTGCAACACTGGTTCAACCTGGCCGATCTGGCGTGCGAGGA 357 Query 9299 TGCGCTCTACGACAGCATCGCGATGCGCGCCTTCGCGGGCATCGACCTGGCGCGCGAGAA 9358 || || || |||||| | ||||| ||| | |||||| ||||||| ||||| Sbjct 356 GGCCCTGTATGACAGCGCCAGTCTGCGCCGCTTTGTGGGCATTGACCTGGGTCGCGAACG 297 Query 9359 CGTGCCGGACGCCACCACGCTGTTGAAATTCCGGCGCCTGCTGGTCGAGCACGCACTGAC 9418 |||||| || |||||||||||| |||| ||||| ||||| |||||| |||| Sbjct 296 CGTGCCCGATGCCACCACGCTGCTGAAGTTCCGCAAACTGCTCCATGAGCACAAACTG-G 238 Query 9419 GCGAAAGC-TGTTCGACGAGATCGGCATCGAGTTGTGCGAGCGCGGGCTGATGATGAAGG 9477 ||||| | |||||| | || | ||| | ||| ||||| || | | | | || Sbjct 237 GCGAAGCCTTGTTCGCCAAGGTAGGCCAGCAATTGCAGGAGCGGGGCTTCAAGGTCAACA 178 Query 9478 AAGGCACGCTGGTGGATGCGACGATCTTCGAGGCTGCGCCG-TCCACGAAGAACGCCGGG 9536 || || | |||||||| || ||| ||| || || | | || || |||||||||| Sbjct 177 CCGGAACTATCGTGGATGCCACCATCATCGCAGC-GCCCAGTTCTACCAAGAACGCCGAC 119 Query 9537 AAGAGCCGTGACCCGGAGATGCATCAGACGAAGAAGGGCAACGACTGGTATTTCGGCATG 9596 ||| |||||||| || ||||||||||| || ||| | | ||||||||||||||| Sbjct 118 AAGGCGCGTGACCCCGACATGCATCAGACTCGCAAAGGCCAGCAATGGTATTTCGGCATG 59 Query 9597 AAGGCCCATGTCGGCGTCGAC-GCCGACTCGGGTCTGGTGCATAGCG 9642 ||| || |||| || ||| ||| | |||| |||| ||| |||| Sbjct 58 AAGCTGCACATCGGTGTGGACAGCCAAACCGGG-CTGGCGCACAGCG 13 >seq11070 Length=608 Score = 150 bits (166), Expect = 4e-32 Identities = 367/541 (68%), Gaps = 29/541 (5%) Strand=Plus/Minus Query 9143 GATGGAGAAGGTCGTCCCTTGGTCGCGGCTGCTGT-CGGTGATCGGGCCGTATTACCCGA 9201 |||||| | |||| || ||| | |||| ||| | || |||| || | ||||||| Sbjct 598 GATGGACACCATCGTGCCGTGGGCTGAGCTG-TGTGCCGTCATCGAGCTCCACTACCCGA 540 Query 9202 AGGGCGAGCGTGGCCGGCCGCCGATTGGCCTGGAACGGATGCTGCGGATCTACTTGCTGC 9261 ||| || || || ||||| ||||||||||| || |||||||| || ||||| ||| Sbjct 539 AGGCCGGCAAGGGGCGTCCGCCCATTGGCCTGGAGCGCATGCTGCGCATGTACTTCGTGC 480 Query 9262 AGCAGTGGTACGGGTTGTCGGACGAAGGGCTT-GAAGATGCGCTCTACGACAGCATCGCG 9320 |||| |||| | | | ||||| || || ||||| ||||| | ||||||| ||| Sbjct 479 AGCACTGGTTCAACCTCGCCGACGA-GGCCTGCGAAGAAGCGCTGTTGGACAGCACGGCG 421 Query 9321 ATGCGCGCCTTCGCGGGCATCGACCTGGCGCGCGAGAACGTGCCGGACGCCACCACGCTG 9380 ||||| ||||| || ||||||||||| |||||| |||||| |||| |||||| || Sbjct 420 CTGCGCCGCTTCGTGGCCATCGACCTGGGCCGCGAGCGCGTGCCCGACGGCACCACCTTG 361 Query 9381 TTGAAATTCCGGCGCCTGCTGGTCGA--GCACGCAC-----TGACGCGAAAGCTGTTCGA 9433 |||| ||||| || ||||||| || || |||| | ||| | ||||||| Sbjct 360 CTGAAGTTCCGCCGGCTGCTGGAGGACGACAAGCACAAGCTGGGCGCTGCA-CTGTTCGC 302 Query 9434 CGAGATCGGCATCGAGTTGTGC-GAGCGCGGGCTGATGATGAAGGAAGGCAC--GC---- 9486 | || |||| | || | ||| | || |||| ||||||| ||||| || Sbjct 301 CAAGGTCGG--TGAAGGT-TGCAGGGCAAGGGC-----ATGAAGGTCGGCACTGGCACCA 250 Query 9487 TGGTGGATGCGACGATCTTCGAGGCTGCGCCGTCCACGAAGAACG-CCGGGAAGAGCCGT 9545 | || || || || ||| || | | || || || ||||||| | || ||| || Sbjct 249 TCGTCGACGCCACCATCATCTCGTCGCCGAGCTCGACCAAGAACGACAAGGTCGAG-CGC 191 Query 9546 GACCCGGAGATGCATCAGACGAAGAAGGGCAACGACTGGTATTTCGGCATGAAGGCCCAT 9605 ||| |||||||| ||||| || ||||| | |||| ||||| ||||| || Sbjct 190 GACGGCGAGATGCACCAGACCCGCAAAGGCAAGCAGTGGTTCTTCGGACTGAAGCTGCAC 131 Query 9606 GTCGGCGTCGACGCCGACTCGGGTCTGGTGCATAGCGTGGTCACCACGGCGGCCAACGAG 9665 ||||||| ||| | | | || |||| ||| |||| ||| ||||| ||||||| | Sbjct 130 ATCGGCGTGGACAGCAAGACCGGCCTGGCGCACAGCGCCGTCGTGACGGCAGCCAACGTG 71 Query 9666 C 9666 | Sbjct 70 C 70 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118961780259084