Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq4974 84.2 3e-11 >seq4974 Length=3366 Score = 84.2 bits (92), Expect = 3e-11 Identities = 116/157 (74%), Gaps = 4/157 (3%) Strand=Plus/Minus Query 126591 CGTATACCAGAAATTGGAGACAAATTTTGTTCTGGA-ATGGCCCAAAAAGGAACTTGTGG 126649 ||||| ||| | ||||| ||||||||| | | || |||| | |||||||||| ||||| Sbjct 236 CGTATTCCACAGATTGGCGACAAATTTGCTAGTAGACATGGTC-AAAAAGGAACGTGTGG 178 Query 126650 TATGATTTATGCACAAGAAGATATGCCGTTTACACAATCA-GGTATGACCCCCGATATTA 126708 ||||| |||| |||||||| ||||| || | | ||| ||||| || ||| | | Sbjct 177 TATGACTTATCGTCAAGAAGACATGCCATTCA-ATTGTCATGGTATTTGTCCTGATTTAA 119 Query 126709 TAATTAATCCAAATTGTATACCGTCAAGAATGACCAT 126745 | |||||||| |||| || || || | |||||||| Sbjct 118 TTATTAATCCTCATTGCATTCCATCTCGTATGACCAT 82 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657985039897640