Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= NC_018843.1 Length=103299 Score E Sequences producing significant alignments: (Bits) Value seq29823 111 1e-19 >seq29823 Length=760 Score = 111 bits (122), Expect = 1e-19 Identities = 191/273 (70%), Gaps = 6/273 (2%) Strand=Plus/Plus Query 79549 ACGACCAACAATCGGATGGAGATGATGGGCGCCCTGATTGCGCTGGAGCGTCTGAAGTAC 79608 ||||||||||| || |||||| |||||| ||| | | ||| ||| |||||| Sbjct 311 ACGACCAACAACCGCATGGAGCTGATGGCCGCGATCCAGGGGCTCGAGGCGCTGAAGCGG 370 Query 79609 CCCTGCAACGT--GATCCTGCATTCCGACAGCCAGTATCTAAAAAACGGCATGACGCTCT 79666 |||||| | || | || || |||||||| || | || ||||| | || | Sbjct 371 CCCTGCCATGTCCGGCTCTTCA--CCGACAGCACCTACGTGAAGGACGGCGTTACCAAGT 428 Query 79667 GGATGAAAGGCTGGAAGCGTAACGGATGGATCACGTCTGAGAAGAAGCCAGTCAAAAACG 79726 |||| | ||||||||| ||||| ||| |||||| || |||||||| || || |||| Sbjct 429 GGATCCACGGCTGGAAGAAGAACGGCTGGCGCACGTCGGACAAGAAGCCGGTGAAGAACG 488 Query 79727 TCGATCTCTGGAAACGTCTTGATGCGGCCGCCAGCCGT-CACAATGTCCGCTGGAAGTGG 79785 |||| |||||| | || || || || ||| | ||||| || | ||| ||| | ||| Sbjct 489 TCGAACTCTGGCAGCGGCTCGACGCCGCC-CGTGCCGTCCATCAGGTCGAGTGGCACTGG 547 Query 79786 GTTAAAGGTCATGCCGGTCATCGCGAGAACGAA 79818 || || || ||| ||| |||| |||||||||| Sbjct 548 GTGAAGGGCCATAGCGGCCATCCCGAGAACGAA 580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330227385043740