Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= NC_019445.1 Length=44784 Score E Sequences producing significant alignments: (Bits) Value seq16859 120 9e-23 >seq16859 Length=703 Score = 120 bits (132), Expect = 9e-23 Identities = 331/498 (66%), Gaps = 21/498 (4%) Strand=Plus/Minus Query 18069 GCAGGTGACCGATTCCGTTGGCATGCTGGAAACCTATGCTGAAGTCGATAAGTCACTGGC 18128 |||| | ||||| || |||||||| || |||||| | || |||| ||| | ||||| Sbjct 680 GCAGATCACCGACTCGTGCGGCATGCTCGAGACCTATTCGGAGATCGACAAGGCGCTGGC 621 Query 18129 TGATCTGAACGGCAATACCGCCGAATTC-CGCCTGTCTGAAGACCGCGCATTTATTGAAG 18187 || || |||||||| || || || || |||||||| || |||||||| || | || | Sbjct 620 CGACCTCAACGGCAACACGGC-GACTTATCGCCTGTCCGAGGACCGCGCCTTCCTCGAGG 562 Query 18188 CGATGAATCAGCAGATGGCGCAGACGCTGTTTTATGGTGATTCCAGCGTT-AACCCTCAG 18246 | ||| |||||| | || | |||||| || || | || ||| || || | Sbjct 561 GGCTGACGCAGCAGCTCGCCGGGGTGCTGTTCTACGGCAACACC-GCGACCAATCCCGAA 503 Query 18247 CAGTTTATGGGACTGTCCTCCCGCTATTCCAG--CCT-------GTCTGCGGGTAATGCT 18297 | || ||||| | | | ||||| || ||| | | || | || Sbjct 502 CGCTTCATGGGGTTCGCGCCGCGCTACAACACGACCTCGACGTCGACGTCGCAGACCGCC 443 Query 18298 CAGAACATCATTGATGCTGGTGGCACGGGTACAGATAACACCTCTATCTGGTTAGTGGTG 18357 | ||| |||| | | || || |||| | || ||||| || |||||| | || | Sbjct 442 AACAACTTCATCGCGGGCGGCGGTTCGGGCTCCGACAACACGTCGATCTGGCTGGTCGGC 383 Query 18358 TGGGGCGAAAACACCGTGCATGGCATCTTCCCGAAAGGGCAG-AAGGCTGGCATCCAGAT 18416 |||||||| |||||||| ||||||||||| |||||||| ||||| || | ||| Sbjct 382 TGGGGCGATCTTACCGTGCACGGCATCTTCCC-CAAGGGCAGCAAGGCCGGGCTGTCGAT 324 Query 18417 GGAAGATAAAGGCCAGGTGACACTGGAAGATGCGAATGGCGGCAA---GTACGAAGGCTA 18473 | |||| ||| || ||| ||| || ||| | |||||| ||| | ||||| Sbjct 323 GAAAGACCTCGGCGAGCAGACGCTGCTCGACGCG---GCCGGCAATCGCTACCAGGGCTA 267 Query 18474 CCGTACCCATTACAAATGGGACAACGGGCTTGCTCTGCGTGACTGGCGTTATGTTGTTCG 18533 ||| ||||| ||||| |||||| ||| || | |||| || ||||| ||||| || || Sbjct 266 CCGCACCCACTACAAGTGGGACGCCGGCCTCACGGTGCGCGATTGGCGCTATGTCGTGCG 207 Query 18534 CATTGCAAACATCGATGT 18551 ||| | |||||||| || Sbjct 206 CATCGGCAACATCGACGT 189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143100807018468