Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30]
50,809 sequences; 101,867,045 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq1807 91.5 3e-13
seq146 84.2 4e-11
>seq1807
Length=15346
Score = 91.5 bits (100), Expect = 3e-13
Identities = 119/162 (73%), Gaps = 2/162 (1%)
Strand=Plus/Minus
Query 221999 GGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATC 222058
||||||||||||||||| | | | ||| |||| | |||||| || || |||| |
Sbjct 7954 GGACACATCAGACTCCAAATTTCATCATTTTTCACCCGATTCATGAAAAGATCTGGGACC 7895
Query 222059 CACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACG-CCGTTGTTTTTCCTCAG 222117
|||||||| ||| | ||| | || || | || || ||| || | ||| | | |||
Sbjct 7894 CACAGCGCTAAAAACAAATCGCGTGTTCGTT-CTTCTTCACTTCCATGGTTCCTGCGCAG 7836
Query 222118 ATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATA 222159
||||||||| ||||| || ||||||||||| ||||| |||||
Sbjct 7835 ATCCAAAAATTCAAATATATCAGCGTGCCAAGGCTCGAGATA 7794
>seq146
Length=10098
Score = 84.2 bits (92), Expect = 4e-11
Identities = 115/161 (71%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 221999 GGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATC 222058
|||||||||| |||||| | || ||| || | ||||| || | || ||||||
Sbjct 9548 GGACACATCAAACTCCATATCCCGTCACTTTTCACACGTTGCATAAACAAATCGGGGATC 9607
Query 222059 CACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGA 222118
||||| | |||| | ||||| | | || || ||| |||| ||||||| ||
Sbjct 9608 CACAGTCCAAGAAACAAATCTCGTGCTCTCTCTTCTTCCGTTCCGTGATTTTTCCGCAAG 9667
Query 222119 TCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATA 222159
|||||||| ||||| ||||||| |||||| ||||||| |||
Sbjct 9668 TCCAAAAATTCAAAGATGTCAGAGTGCCATGGCTCCAAATA 9708
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928254879056960
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |