Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq146 100 1e-16 >seq146 Length=10098 Score = 100 bits (110), Expect = 1e-16 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||| ||||| || ||||||| | || ||| ||||||| |||||| |||||| | Sbjct 9589 CATAAACAAATCGGGGATCCACAGTCCAAGAAACAAATCTCGTGCTCTCTCTTCTTCCGT 9648 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 ||||||||| || | || || || ||||| || || ||||||||||| || ||||| Sbjct 9649 TCCGTGATTTTTCCGCAAGTCCAAAAATTCAAAGATGTCAGAGTGCCATGGCTCCAAATA 9708 Query 26053 GATAGCAAAACTACCTTTTCTTTTT 26077 || ||||| |||||| ||||| Sbjct 9709 AATTGCAAACGATCCTTTTTTTTTT 9733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252883308854675