Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= NC_020844.1 Length=40695 Score E Sequences producing significant alignments: (Bits) Value seq18560 111 4e-20 >seq18560 Length=3023 Score = 111 bits (122), Expect = 4e-20 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 2409 GTCGTAGTAATACTTGGGCGACTTGGACAGCAGGAAGATGTACTCGTGCGCCTTTGTGCA 2468 ||||||||||||||| |||||||| |||| ||| | |||| |||| | Sbjct 102 GTCGTAGTAATACTTCTCCGACTTGGTGAGCATGAATAGAAACTCATGCGAGCGAGCCGG 161 Query 2469 GCGGTCGCGCACGCTCTCCGGCATTGGGTTTGGCTTGTGCCAGATAATATC-CTGACGCA 2527 ||| || |||||||| ||||| | ||||||||||| ||| | ||| || ||| |||| Sbjct 162 GCGATCCTTGACGCTCTCGGGCATCGCGTTTGGCTTGTTCCACACAATGTCACTG-CGCA 220 Query 2528 GGTACCAGCCGTCGGCTTGCAGGGCGAACGCTACGCGCCAGGGGATGCCGATAAGGTCTT 2587 | |||||||| || | |||| ||||||||| | ||||| || |||||||| | ||| | Sbjct 221 GATACCAGCCATCATCCTGCAAGGCGAACGCCAGCCGCCACGGAATGCCGATCAAGTCCT 280 Query 2588 TTGCTTTCAATCC 2600 ||| ||||| || Sbjct 281 TTGGCTTCAAGCC 293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130023901822506