Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30]
50,809 sequences; 101,867,045 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq45910 113 9e-20
seq19824 113 9e-20
seq45780 111 3e-19
seq49792 98.7 2e-15
seq40549 98.7 2e-15
seq35091 98.7 2e-15
seq38859 96.9 7e-15
seq23482 96.9 7e-15
seq14659 96.9 7e-15
seq2860 96.9 7e-15
seq50756 93.3 8e-14
seq48569 93.3 8e-14
seq40838 87.8 4e-12
seq25271 87.8 4e-12
>seq45910
Length=1805
Score = 113 bits (124), Expect = 9e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369
||||| | | |||||| || || || || || ||||| ||||| || || |
Sbjct 668 CCACCACGCAAACGTAACACCAAGTGCAACGTGCTTTCTTTTTGAATATTGTAGTCGCTT 609
Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429
|| |||| | |||| ||||||||||| || ||||| || || | |||||| ||||| |||
Sbjct 608 AAAGTTCTTCCATCTTCCAATTGTTTTCCCGCAAAAATCAAGCGCTGTTGTTCAGGGGGT 549
Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489
|||||||| |||||||| ||||| || ||||| || | || | || ||
Sbjct 548 ATTCCTTCCTTATCTTGAATTTTCGCCTTGACATTTTGGATCGTGTCATTGGGCTCGACA 489
Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTT 192521
|||| |||||||||||||||||||| || ||
Sbjct 488 TCTAAGGTAATGGTTTTACCAGTTAAAGTCTT 457
>seq19824
Length=8713
Score = 113 bits (124), Expect = 9e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369
|| ||||| | ||| || || ||||| ||||| |||||| ||| || || |||
Sbjct 6102 CCTCCTCTCAAACGCAACACCAAATGCAAAGTGCTCTCTTTTTGGATGTTGTAGTCACTC 6161
Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429
|| || || |||| ||||||||||| || ||||| ||||| | ||||| || || ||
Sbjct 6162 AAAGTGCGGCCATCCTCCAATTGTTTTCCCGCAAAAATTAAACGTTGTTGCTCTGGAGGA 6221
Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489
|||||||| |||||||| ||||| ||| ||||| || | || | ||| ||
Sbjct 6222 ATTCCTTCCTTATCTTGAATTTTGGCTTTGACATTCTGGATGGTGTCGTTGGGTTCAACG 6281
Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| | ||||| ||||| ||||| || || |||| || || |||||
Sbjct 6282 TCCAACGTAATTGTTTTTCCAGTCAAAGTCTTAACGAAGATTTGCAT 6328
Score = 96.9 bits (106), Expect = 7e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
|||||| | | ||| ||||| ||||| || ||| ||||| ||| || || ||
Sbjct 6332 ACCACCACGCAAACGCAATACCAAATGCAAGGTACTTTCTTTTTGGATGTTGTAGTCGCT 6391
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
|| |||| | |||| || |||||||| || |||||||| | | ||||| ||||| ||
Sbjct 6392 CAAAGTTCTTCCATCCTCTAATTGTTTGCCGGCAAAGATGAGACGTTGTTGCTCAGGCGG 6451
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| ||||| || || || ||||| || ||||| || | || | ||| ||
Sbjct 6452 AATACCTTCCTTGTCCTGGATTTTCGCCTTGACATTTTGGATGGTGTCGTTGGGTTCCAC 6511
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| | ||||||||||| || || || ||||||| ||| || |||||
Sbjct 6512 GTCCAACGTAATGGTTTTTCCGGTCAAGGTTTTAACAAAGATTTGCAT 6559
Score = 93.3 bits (102), Expect = 8e-14
Identities = 144/202 (71%), Gaps = 4/202 (2%)
Strand=Plus/Plus
Query 192328 ACTAAATGTAAAGTAGCCT--CTTTAGAGATATTATAATCAGATAATGTTCGTTCATCAT 192385
|| ||||| ||||| || | |||| | ||| |||||||| || || || |||| |
Sbjct 6877 ACCAAATGCAAAGT-GCTTTCCTTTTG-GATGTTATAATCGCTCAAAGTGCGGCCATCCT 6934
Query 192386 CCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTT 192445
||||||| || || || ||||| || | ||||| ||||| || |||||||| |||||||
Sbjct 6935 CCAATTGCTTGCCGGCGAAGATCAAACGTTGTTGCTCAGGGGGGATTCCTTCCTTATCTT 6994
Query 192446 GTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTT 192505
| ||||| ||| || || || | ||| | ||| || || | ||||||||||
Sbjct 6995 GAATTTTGGCTTTCACGTTTTGGATTGTATCGTTGGGTTCCACATCCAACGTAATGGTTT 7054
Query 192506 TACCAGTTAATGTTTTAATAAA 192527
| || || ||||| || | |||
Sbjct 7055 TTCCGGTCAATGTCTTGACAAA 7076
Score = 89.7 bits (98), Expect = 1e-12
Identities = 151/215 (70%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT--CTTTAGAGATATTATAATCA 192366
|||||||| | ||| | || |||||||| || || | |||| || || ||||||||
Sbjct 6563 ACCACCTCGTAAACGCAGCACCAAATGTAAGGT-GCTTTCCTTTTGA-ATGTTATAATCG 6620
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| || || | || || |||||||| || ||||||||||||| ||||| |||||
Sbjct 6621 CTCAAAGTGCGACCGTCTTCTAATTGTTTTCCTGCAAAGATTAATCGTTGTTGTTCAGGA 6680
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| ||||| || || || || | ||| | |||
Sbjct 6681 GGAATGCCTTCCTTGTCTTGGATTTTTGCCTTCACGTTTTGAATTGTATCGTTGGGTTCC 6740
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 192521
|| || | || |||||||| || || || |||||
Sbjct 6741 ACATCCAACGTGATGGTTTTTCCGGTCAAAGTTTT 6775
>seq45780
Length=809
Score = 111 bits (122), Expect = 3e-19
Identities = 154/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT-CTTTAGAGATATTATAATCAGA 192368
|||||||| | ||| || ||||||||||||||| | |||| || ||||| |||||
Sbjct 531 CCACCTCTTAAACGCAAGACTAAATGTAAAGTACTTTCCTTTTGA-ATATTGTAATCGCT 589
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
||||| || | || |||||||| || ||||| || || |||| |||||| ||||| ||
Sbjct 590 CAATGTGCGACCGTCTTCCAATTGCTTGCCAGCGAAAATCAATCGCTGTTGCTCAGGAGG 649
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| ||||||||||| || ||||| || ||||| |||| ||| | |||||
Sbjct 650 AATGCCTTCTTTATCCTGAATTTTGGCCTTAACATTTTGGATAGTATCGTTAGGCTCTAC 709
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 192521
|| | || || || || || || || |||||
Sbjct 710 GTCCAACGTTATCGTCTTGCCGGTCAAGGTTTT 742
>seq49792
Length=5355
Score = 98.7 bits (108), Expect = 2e-15
Identities = 156/220 (71%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT--CTTTAGAGATATTATAATCAG 192367
||||| | | ||| ||||||||||| || || || | |||| | ||| || |||||
Sbjct 450 CCACCGCGTAAACGCAATACTAAATGCAACGT-GCTTTCCTTTTG-GATGTTGTAATCGC 393
Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427
|| |||| | |||| ||||| ||||| |||||||||||||||| ||||| || ||||
Sbjct 392 TCAAAGTTCTTCCATCTTCCAACTGTTTTCCAGCAAAGATTAATCGTTGTTGCTCTGGTG 333
Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487
| || ||||| || ||||| || || || || || || | ||| | || |
Sbjct 332 GAATGCCTTCCTTGTCTTGGATCTTTGCCTTAACGTTTTGGATTGTATCATTGGGCTCAA 273
Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAA 192527
| |||| || |||||||| || || ||||| || | |||
Sbjct 272 CGTCTAAGGTTATGGTTTTGCCCGTCAATGTCTTCACAAA 233
>seq40549
Length=748
Score = 98.7 bits (108), Expect = 2e-15
Identities = 151/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAGA 192368
|||||||| | || || || || ||||||||| || ||| || || || || ||
Sbjct 355 CCACCTCTTAAGCGCAACACCAAGTGTAAAGTACTTTCCTTTTGA-ATGTTGTAGTCGCT 297
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
||||| || | || |||||||| || ||||| || || |||| |||||| ||||| ||
Sbjct 296 CAATGTGCGACCGTCTTCCAATTGCTTGCCAGCGAAAATCAATCGCTGTTGCTCAGGAGG 237
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| ||||||||||| || ||||| ||| ||||| |||| ||| | |||||
Sbjct 236 AATGCCTTCTTTATCCTGAATTTTGGCTTTAACATTTTGGATAGTATCGTTGGGCTCTAC 177
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 192521
|| | || || || ||||| || || |||||
Sbjct 176 GTCCAACGTGATCGTCTTACCGGTCAAGGTTTT 144
>seq35091
Length=3122
Score = 98.7 bits (108), Expect = 2e-15
Identities = 153/215 (71%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT--CTTTAGAGATATTATAATCA 192366
|||||| | | ||| || |||||||| || || || | |||| | ||| || |||||
Sbjct 653 ACCACCGCGTAAACGCAACACTAAATGCAACGT-GCTTTCCTTTTG-GATGTTGTAATCG 596
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| |||| | |||| |||||||| || |||||||||||||| | |||||| || |||
Sbjct 595 CTCAAGGTTCTTCCATCTTCCAATTGCTTTCCAGCAAAGATTAAGCGCTGTTGCTCTGGT 536
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| || || || || || || | || | ||
Sbjct 535 GGAATACCTTCCTTGTCTTGGATCTTTGCCTTGACGTTTTGGATCGTGTCATTGGGCTCA 476
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 192521
|| |||| ||||||||||||||||| || || ||
Sbjct 475 ACGTCTAAGGTAATGGTTTTACCAGTCAAGGTCTT 441
Score = 95.1 bits (104), Expect = 2e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369
||||| | | |||||| || || ||||| || ||||| || || || || |
Sbjct 1289 CCACCACGCAAACGTAACACCAAGTGTAACGTGCTTTCTTTTTGAATGTTGTAGTCGCTT 1230
Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429
|| |||| | | || ||||||||||| || ||||| || || | ||||| ||||| ||
Sbjct 1229 AAAGTTCTTCCGTCTTCCAATTGTTTTCCTGCAAAAATCAAGCGTTGTTGTTCAGGGGGG 1170
Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489
|||||||| |||||||| ||||| ||| ||||| || | || | ||| ||
Sbjct 1169 ATTCCTTCCTTATCTTGAATTTTTGCTTTGACATTTTGGATCGTGTCGTTGGCTTCAACA 1110
Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTT 192521
|||| ||||||||||| || || || || ||
Sbjct 1109 TCTAAGGTAATGGTTTTGCCGGTCAAAGTCTT 1078
Score = 87.8 bits (96), Expect = 4e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369
||||||| | ||| || |||||||| | || ||||| ||| ||||| |||
Sbjct 973 CCACCTCGTAAACGCAACACTAAATGCAGCGTGCTTTCTTTTTGGATGTTATAGTCACTC 914
Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429
|| || | | |||| || |||||||| || ||||||||||||| || || || || ||
Sbjct 913 AAGGTCCTTCCATCTTCTAATTGTTTTCCGGCAAAGATTAATCGTTGCTGTTCTGGAGGA 854
Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489
|| ||||| || ||||| ||||| ||| ||||| || | || | || ||
Sbjct 853 ATGCCTTCCTTGTCTTGGATTTTGGCTTTCACATTTTGGATCGTGTCATTGGGCTCAACG 794
Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAA 192527
|| | || || ||||| ||||||| ||||| | |||
Sbjct 793 TCCAATGTGATTGTTTTCCCAGTTAGAGTTTTCACAAA 756
>seq38859
Length=993
Score = 96.9 bits (106), Expect = 7e-15
Identities = 111/146 (76%), Gaps = 4/146 (3%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT--CTTTAGAGATATTATAATCA 192366
|||||| | | ||| || || ||||| || || || | |||| | |||||| ||||||
Sbjct 851 ACCACCGCGTAAACGCAACACCAAATGCAACGT-GCTTTCCTTTTG-GATATTGTAATCA 794
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| |||| | |||| |||||||| || |||||||||||||| | |||||| || |||
Sbjct 793 CTCAAGGTTCTTCCATCTTCCAATTGCTTTCCAGCAAAGATTAAGCGCTGTTGCTCTGGT 734
Query 192427 GGTATTCCTTCTTTATCTTGTATTTT 192452
|| || ||||| || ||||| || ||
Sbjct 733 GGAATACCTTCCTTGTCTTGGATCTT 708
Score = 93.3 bits (102), Expect = 8e-14
Identities = 151/217 (70%), Gaps = 8/217 (4%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
||| |||| | || ||||| ||||| || ||| ||||| ||| ||||| |||
Sbjct 525 ACCGCCTCGTAATCGCAATACCAAATGCAACGTACTTTCTTTTTGGATGTTATAGTCACT 466
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
|| ||||| |||| || ||||| || ||||||||||| |||| || || || |||||
Sbjct 465 CAAGGTTCGGCCATCCTCTAATTGCTTTCCAGCAAAGATCAATCGTTGCTGCTCTGGTGG 406
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGAT----T 192484
|| ||||| || ||||| ||||| ||| || ||| | || | || || | |
Sbjct 405 GATGCCTTCCTTGTCTTGGATTTTGGCTTTCAC----GTTCTGGATTGTGTCGTTGGGCT 350
Query 192485 CTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 192521
| || || | || || ||||| || ||||| |||||
Sbjct 349 CGACATCCAACGTGATTGTTTTTCCGGTTAAGGTTTT 313
>seq23482
Length=3631
Score = 96.9 bits (106), Expect = 7e-15
Identities = 125/172 (73%), Gaps = 8/172 (5%)
Strand=Plus/Minus
Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413
||| |||||||| ||||||| | |||| || |||||||| || ||||| || || |
Sbjct 812 GATGTTATAATCGCTCAATGTTCTTCCATCTTCTAATTGTTTGCCGGCAAATATCAAACG 753
Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473
||||| ||||| || ||||||||||| || || ||||| ||| || ||| | ||
Sbjct 752 TTGTTGTTCAGGAGGGATTCCTTCTTTGTCCTGAATTTTGGCTTTAAC----GTTTTGGA 697
Query 192474 ATCTGACGAT----TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 192521
| || || | || || || || ||||| || ||||| |||||||||||
Sbjct 696 TTGTGTCGTTGGGCTCGACGTCAAGGGTAATTGTCTTACCCGTTAATGTTTT 645
>seq14659
Length=7011
Score = 96.9 bits (106), Expect = 7e-15
Identities = 107/143 (75%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369
|| ||||| ||||| | ||| ||||| |||||| ||||| || || |||||||||
Sbjct 4549 CCTCCTCTGAGACGCAGTACCAAATGCAAAGTACTATCTTTCTGAATGTTGTAATCAGAT 4490
Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429
|| || | |||| |||| ||| || ||||||||||||| | |||||||| |||||
Sbjct 4489 AACGTCCTGCCATCTTCCAGTTGCTTTCCAGCAAAGATTAGGCGTTGTTGATCGGGTGGG 4430
Query 192430 ATTCCTTCTTTATCTTGTATTTT 192452
|| || || || ||||| || ||
Sbjct 4429 ATGCCCTCCTTGTCTTGGATCTT 4407
>seq2860
Length=5989
Score = 96.9 bits (106), Expect = 7e-15
Identities = 147/206 (71%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 192324 TAATACTAAATGTAAAGTAGCCT--CTTTAGAGATATTATAATCAGATAATGTTCGTTCA 192381
||| || ||||| || || || | |||| | ||||||||||||| ||| || || ||
Sbjct 1705 TAACACCAAATGCAAGGT-GCTTTCCTTTTG-GATATTATAATCACTTAAGGTGCGGCCA 1648
Query 192382 TCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTA 192441
|| |||||||| || ||||||||||| |||| |||| ||| | || || |||| |||
Sbjct 1647 TCTTCCAATTGCTTTCCAGCAAAGATCAATCGTTGTTACTCATGAGGAATGCCTTAATTA 1588
Query 192442 TCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATG 192501
| || ||||| ||| ||||| || | ||| ||| || || | || |||
Sbjct 1587 TACTGAATTTTGGCTTTCACATTTTGGATGGTATCGTTGTGTTCCACATCCAACGTGATG 1528
Query 192502 GTTTTACCAGTTAATGTTTTAATAAA 192527
||||| |||||||| ||||| | |||
Sbjct 1527 GTTTTTCCAGTTAAGGTTTTCACAAA 1502
>seq50756
Length=522
Score = 93.3 bits (102), Expect = 8e-14
Identities = 152/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
|||||||| | ||| || || ||||| || || ||||| || ||||||||
Sbjct 175 ACCACCTCGTAAACGCAAGACCAAATGCAAGGTGCTTTCTTTTTGAATGTTATAATCGCT 234
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
|| || || | |||||||||||||| || ||||| || || | || || ||| | ||
Sbjct 235 CAAAGTACGACCGTCATCCAATTGTTTGCCGGCAAAAATCAAACGTTGCTGTTCATGAGG 294
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| ||||| ||||| || ||||| |||||| || |||| ||| | ||| ||
Sbjct 295 AATGCCTTCATTATCCTGAATTTTGGCTTTTACGTTTTGGATAGTATCGTTGGGTTCCAC 354
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAA 192527
|| | || || ||||| |||||||| ||||| | |||
Sbjct 355 ATCCAACGTGATAGTTTTTCCAGTTAAGGTTTTCACAAA 393
>seq48569
Length=404
Score = 93.3 bits (102), Expect = 8e-14
Identities = 154/216 (71%), Gaps = 6/216 (3%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT--CTTTAGAGATATTATAATCA 192366
|||||||| | ||| || || ||||| || || || | |||| | ||| ||||||||
Sbjct 300 ACCACCTCGTAAACGCAACACCAAATGCAAGGT-GCTTTCCTTTTG-GATGTTATAATC- 244
Query 192367 GATAATGTT-CGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425
||| | | | | |||| |||||||| || || ||||||||||||| |||||| |||||
Sbjct 243 GATCAGGGTGCAGCCATCCTCCAATTGCTTGCCGGCAAAGATTAATCGCTGTTGCTCAGG 184
Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485
|| || |||| ||||| || ||||| ||| || || |||| || | ||
Sbjct 183 AGGAATACCTTACTTATCCTGGATTTTGGCTTTCACGTTTTGGATAGTGTCATTGGGCTC 124
Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 192521
|| || | || |||||||| ||||| || |||||
Sbjct 123 CACATCCAACGTGATGGTTTTTCCAGTCAAAGTTTT 88
>seq40838
Length=12235
Score = 87.8 bits (96), Expect = 4e-12
Identities = 153/222 (69%), Gaps = 8/222 (4%)
Strand=Plus/Plus
Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369
||||| | | |||||| ||||| ||||| || ||||| || || ||||| |
Sbjct 3748 CCACCACGTAAACGTAACACTAAGTGTAACGTGCTTTCTTTTTGAATGTTGTAATCGCTT 3807
Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429
|| || || |||| ||||||||||| || || ||||| || | ||||| ||||| ||
Sbjct 3808 AAAGTGCGACCATCTTCCAATTGTTTTCCTGCGAAGATCAAGCGTTGTTGTTCAGGAGGG 3867
Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGAC----GATTC 192485
|||||||| || ||||| ||||| || || ||| | || | || | | ||
Sbjct 3868 ATTCCTTCCTTTTCTTGAATTTTTGCCTTAAC----GTTTTGGATTGTGTCATTGGGCTC 3923
Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAA 192527
|| |||| ||||||||||| || || || || || | |||
Sbjct 3924 GACATCTAATGTAATGGTTTTGCCGGTCAAAGTCTTCACAAA 3965
>seq25271
Length=6169
Score = 87.8 bits (96), Expect = 4e-12
Identities = 109/146 (75%), Gaps = 4/146 (3%)
Strand=Plus/Plus
Query 192321 ACGTAATACTAAATGTAAAGTAGCCT--CTTTAGAGATATTATAATCAGATAATGTTCGT 192378
||| || || ||||| || || || | |||| | ||||||||||||| ||| || |
Sbjct 681 ACGCAACACCAAATGCAAGGT-GCTTTCCTTTTG-GATATTATAATCACTTAAGGTGCAG 738
Query 192379 TCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCT 192438
|||| |||||||| || ||||||||||| || | | ||| ||||| || || |||||
Sbjct 739 CCATCTTCCAATTGCTTGCCAGCAAAGATCAAACGTTATTGCTCAGGAGGAATGCCTTCC 798
Query 192439 TTATCTTGTATTTTATTTTTTACATT 192464
||||| || |||||| ||| || ||
Sbjct 799 TTATCCTGAATTTTAGCTTTCACGTT 824
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 983839113057150
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