Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= NC_021298.1 Length=51252 Score E Sequences producing significant alignments: (Bits) Value seq6776 95.1 4e-15 >seq6776 Length=1165 Score = 95.1 bits (104), Expect = 4e-15 Identities = 142/200 (71%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 40452 CCGTACTTCCGGGTGACGTACTGGATCACCTCGCCACGACGCCGGTCAT--CGAAGTCGA 40509 || || ||| || ||| || | |||||||||||| || ||||| ||| |||||||| Sbjct 246 CCATATTTCTGGCGGACATAGTCGATCACCTCGCCGCGGCGCCG--CATGCAGAAGTCGA 303 Query 40510 TGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATGAGTCCGT 40569 | |||| |||||| ||| ||||| ||||| || || || || ||||||| || ||| Sbjct 304 TATCGAAGTCGGGCGGGGAAACGCGTTCGGGATTGAGAAAGCGTTCGAAGAGCAGACCGA 363 Query 40570 GCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACCGGCCGCAG 40629 | || |||| | |||||| ||||| | ||| || |||| | ||||| | | Sbjct 364 AGCGGATGGGATCGATATTGGTGATGCCGAGCAAGTAAGCCACCATGCAGCCGGCACCGG 423 Query 40630 AGCCTCGCCCAGGGCCGACC 40649 |||| || || ||||| ||| Sbjct 424 AGCCACGACCCGGGCCAACC 443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163785918979212