Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= NC_023575.1 Length=45550 Score E Sequences producing significant alignments: (Bits) Value seq16859 89.7 1e-13 >seq16859 Length=703 Score = 89.7 bits (98), Expect = 1e-13 Identities = 160/223 (72%), Gaps = 8/223 (4%) Strand=Plus/Minus Query 5372 CAACACATCGATCTGGCTGATTGGCTGGGGCGAGAACACCGTCCACGGCATCTATCCGAA 5431 |||||| |||||||||||| | ||||||||||| ||||| |||||||||| || || Sbjct 407 CAACACGTCGATCTGGCTGGTCGGCTGGGGCGATCTTACCGTGCACGGCATCTTCCCCAA 348 Query 5432 GGGTTCGCAA-GCCGGCCTGGTCCA-CAAGGATCTTGGTGAAGGCGACGCT-TTCGATGC 5488 ||| |||| ||||| || ||| | || || || || | || |||||| |||| || Sbjct 347 GGG-CAGCAAGGCCGGGCT-GTCGATGAAAGACCTCGGCG-AGCAGACGCTGCTCGACGC 291 Query 5489 CAGCGGCAACCGCTTCCGTGCCCTGATGGA-CCAATACCAGTGGAAGGCCGGCATTGCGG 5547 |||||| |||| || | || | | ||| ||| ||||| | |||||| | ||| Sbjct 290 GGCCGGCAATCGCTACC-AGGGCTACCGCACCCACTACAAGTGGGACGCCGGCCTCACGG 232 Query 5548 TCAAGGACTGGCGTTACATCGTTCGCATCGCGAACATCGATGT 5590 | || ||||| || |||| ||||||| |||||||| || Sbjct 231 TGCGCGATTGGCGCTATGTCGTGCGCATCGGCAACATCGACGT 189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145550528070096