Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= NC_024365.1 Length=51090 Score E Sequences producing significant alignments: (Bits) Value seq18560 100 9e-17 >seq18560 Length=3023 Score = 100 bits (110), Expect = 9e-17 Identities = 91/112 (81%), Gaps = 2/112 (2%) Strand=Plus/Plus Query 22831 CTCCGGCATAGGGTTTGGCTTGTGCCAGATGATGTC-CTGCCGGAGATACCAGCCGTCGT 22889 ||| ||||| | ||||||||||| ||| | ||||| ||| || ||||||||||| || | Sbjct 177 CTCGGGCATCGCGTTTGGCTTGTTCCACACAATGTCACTG-CGCAGATACCAGCCATCAT 235 Query 22890 CCTGCAGCGCGAAGGCCAGGCGCCAGGGCATGCCCATCAAGTCTTTCGGCTT 22941 |||||| ||||| ||||| ||||| || ||||| |||||||| || ||||| Sbjct 236 CCTGCAAGGCGAACGCCAGCCGCCACGGAATGCCGATCAAGTCCTTTGGCTT 287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163267831759416