Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= NC_025115.1 Length=40002 Score E Sequences producing significant alignments: (Bits) Value seq11070 104 6e-18 >seq11070 Length=608 Score = 104 bits (114), Expect = 6e-18 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 18090 GTCGTTGACGTTGGCGGCCGTGCCCAGCACGGTATGCACCAGCCCCGAGTCCGCATCCAC 18149 ||||| |||||||| ||||| | | || | ||| |||| || | | ||||| Sbjct 65 GTCGTGCACGTTGGCTGCCGTCACGACGGCGCTGTGCGCCAGGCCGGTCTTGCTGTCCAC 124 Query 18150 GCCAATGTGCGCTTTCATTCCGAAATGCCACTGGTTACCTTTCTTGGTCTGGTGCATCTC 18209 ||| |||||| |||| |||||| |||||| || ||||| ||||||||||||||| Sbjct 125 GCCGATGTGCAGCTTCAGTCCGAAGAACCACTGCTTGCCTTTGCGGGTCTGGTGCATCTC 184 Query 18210 GGGGTCGCGCTTGCCGCTGCCATTCTTGGTCGAGCTGGGCGCGGCAATCAGCGAGGCGTC 18269 | |||||||| | | || | |||||||||||||| |||| | || | | |||||| Sbjct 185 GCCGTCGCGCTCGACCTTGTCGTTCTTGGTCGAGCTCGGCGACGAGATGATGGTGGCGTC 244 Query 18270 GACCACCGTGCC 18281 ||| | ||||| Sbjct 245 GACGATGGTGCC 256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127807639826712