Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq19824 114 1e-20 seq50756 89.7 4e-13 seq23482 82.4 6e-11 >seq19824 Length=8713 Score = 114 bits (126), Expect = 1e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||||||||| ||||| || || |||||||| |||| |||||| | Sbjct 6559 ATGCAAATCTTTGTTAAAACCTTGACCGGAAAAACCATTACGTTGGACGTGGAACCCAAC 6500 Query 106320 GATTCTGTTGGCCAA---GTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376 || | | |||| || || ||||| ||||| ||||| | || ||| Sbjct 6499 GACACCAT---CCAAAATGTCAAGGCGAAAATCCAGGACAAGGAAGGTATTCCGCCTGAG 6443 Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTAC 106436 |||||| | || || | ||| |||||||||||||| ||| | |||| || |||| ||| Sbjct 6442 CAACAACGTCTCATCTTTGCCGGCAAACAATTAGAGGATGGAAGAACTTTGAGCGACTAC 6383 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 ||||| ||||||||| ||| | ||||| |||||| | || || || || Sbjct 6382 AACATCCAAAAAGAAAGTACCTTGCATTTGGTATTGCGTTTGCGTGGTGG 6333 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 106269 TTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGCGATTCTGTT 106328 || || ||||| ||||| || || ||||| || |||| |||||| |||| | || Sbjct 6781 TTCGTGAAAACTTTGACCGGAAAAACCATCACGTTGGATGTGGAACCCAACGATACAATT 6722 Query 106329 GGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCTT 106388 | ||||| |||||| ||||| |||||| | || ||| |||||| | | Sbjct 6721 CAAAACGTGAAGGCAAAAATCCAAGACAAGGAAGGCATTCCTCCTGAACAACAACGATTA 6662 Query 106389 ATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAACATACAAAAA 106448 || | ||| || |||||||||||||| | ||| || ||||||| ||||| ||||| Sbjct 6661 ATCTTTGCAGGAAAACAATTAGAAGACGGTCGCACTTTGAGCGATTATAACATTCAAAAG 6602 Query 106449 GAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 ||| || ||||||| || || | |||||||| || Sbjct 6601 GAAAGCACCTTACATTTGGTGCTGCGTTTACGAGGTGG 6564 >seq50756 Length=522 Score = 89.7 bits (98), Expect = 4e-13 Identities = 153/221 (69%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 106269 TTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGCGATTCTGTT 106328 ||||| ||||| || ||||| || || || || |||| |||||| |||| || | Sbjct 393 TTTGTGAAAACCTTAACTGGAAAAACTATCACGTTGGATGTGGAACCCAACGATACTAT- 335 Query 106329 GGCCAA---GTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAACAAAGG 106385 |||| || ||| |||||| || || |||||| | || ||| || ||| | Sbjct 334 --CCAAAACGTAAAAGCCAAAATTCAGGATAATGAAGGCATTCCTCATGAACAGCAACGT 277 Query 106386 CTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAACATACAA 106445 | |||| ||| ||||||||||| || || | ||| || ||||||| ||||| ||| Sbjct 276 TTGATTTTTGCCGGCAAACAATTGGATGACGGTCGTACTTTGAGCGATTATAACATTCAA 217 Query 106446 AAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 |||||| || | ||||| || ||| | |||||||| || Sbjct 216 AAAGAAAGCACCTTGCATTTGGTCTTGCGTTTACGAGGTGG 176 >seq23482 Length=3631 Score = 82.4 bits (90), Expect = 6e-11 Identities = 130/185 (70%), Gaps = 6/185 (3%) Strand=Plus/Plus Query 106268 TTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGCGATTCTGT 106327 ||| || |||||||| || || ||||| |||||| | || || ||| ||| | | Sbjct 638 TTTCGTGAAAACATTAACGGGTAAGACAATTACCCTTGACGTCGAGCCCAACGACACAAT 697 Query 106328 TGGCCAA---GTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAACAAAG 106384 |||| || ||| |||||| ||||||||||| | || ||| |||||| | Sbjct 698 ---CCAAAACGTTAAAGCCAAAATTCAGGACAAAGAAGGAATCCCTCCTGAACAACAACG 754 Query 106385 GCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAACATACA 106444 | || | ||| |||||||||||||||||| | ||| || ||||||| ||||| || Sbjct 755 TTTGATATTTGCCGGCAAACAATTAGAAGATGGAAGAACATTGAGCGATTATAACATCCA 814 Query 106445 AAAAG 106449 ||||| Sbjct 815 AAAAG 819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402080463555872