Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= NC_026594.1 Length=56537 Score E Sequences producing significant alignments: (Bits) Value seq8768 136 1e-27 seq11046 80.6 1e-10 >seq8768 Length=1643 Score = 136 bits (150), Expect = 1e-27 Identities = 222/317 (70%), Gaps = 6/317 (2%) Strand=Plus/Plus Query 36805 CGCCCCGCCGTCGAGGCCGAGGAGAAGCTCGGCTACCTGCCCGGCGGCATCGAAGAGAAG 36864 ||||| || || || |||| |||||||| |||| ||||||||||| | | | ||||| Sbjct 334 CGCCCGGCGGTGGAAGCCGGTGAGAAGCTGGGCTTCCTGCCCGGCGACCTGGCGCAGAAG 393 Query 36865 ATGGCTCCGTACCTGATCCCGATGCTGGACGCGGTGATCGACCTGGTTGGC-CCGAC--G 36921 | | ||||||||| |||| || |||||| || ||||||| | ||| |||| | Sbjct 394 GTAGACCCGTACCTGCGCCCGCTGTACGACGCGCTGTACGACCTGATGGGCTTCGACAAG 453 Query 36922 ATGGCCAAGCGCCTGCAGGAGACCCGCCAGCTCGAGATCGCCCCGCTGGCCTACATGCGA 36981 |||| ||| ||| |||| || | |||||||||| ||||||||||| ||||| Sbjct 454 GTGGC---GCGGCTGTTCGAGAAAAACCTGATCGAGATCGCGCCGCTGGCCTATATGCGG 510 Query 36982 GGCCGAACCTTCAACGACACGTTCCTCATCGCCGACGAGATGCAGAACGCCACCCCGCGA 37041 ||||| || | ||| || | ||| ||||| ||| || ||| ||| |||| ||| Sbjct 511 GGCCGCACGCTGAACAACGCCTTCATCATCCTCGATGAAGCGCAAAACACCACGCCGGAG 570 Query 37042 CAGGCCGCGCTGCTGGTGACCCGCCTGGGCTTCGGAACGCGGGCCGTCTTGAACGGTGAC 37101 ||| | || | | |||||| | |||||||| |||| |||||| | | ||| ||| Sbjct 571 CAGATGAAGATGTTCCTCACCCGCATCGGCTTCGGCTCGCGCGCCGTCATTACCGGCGAC 630 Query 37102 CCGGCCCAGTGCGACCT 37118 ||||| |||||| Sbjct 631 GTAACCCAGATCGACCT 647 >seq11046 Length=996 Score = 80.6 bits (88), Expect = 1e-10 Identities = 100/137 (73%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 7835 CTGGCTGGACGACGAGGAGAAGCTCGTGTTCCTGAACGCCTTCGAGATGGACCAGCGCAT 7894 ||| || |||||| | |||||| |||||| || ||| |||||||| ||||||||| Sbjct 813 CTGCCTCGACGACCACGAGAAGGCGGTGTTCAAGACCGCGTTCGAGATCGACCAGCGCTG 872 Query 7895 CCTGCTGCGCCACGCCTCTCAGCGCCAGCGCTGGATCTGCCAGGGCCAGTCGCTGAACTT 7954 ||| | || ||| | | ||| || || ||||||||| |||||||||||||| | Sbjct 873 GCTGGTCGAGCATGCCGCCGACCGCACGCCCTATATCTGCCAGAGCCAGTCGCTGAACCT 932 Query 7955 CTACGTTCCGGAGGACG 7971 || | | |||| |||| Sbjct 933 CTTCCTGCCGGCCGACG 949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180687715007742