Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= NC_027991.1 Length=147303 Score E Sequences producing significant alignments: (Bits) Value seq12554 127 2e-24 >seq12554 Length=549 Score = 127 bits (140), Expect = 2e-24 Identities = 139/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 58088 CTGATTAAAGAACACGGCTGTAAAGCGGGGCTGGTATTCAACCCGGCAACGCCGCTCAGT 58147 ||||| || ||| |||||| ||||| || ||||| ||||||||||| || ||||| || Sbjct 224 CTGATCAAGGAAGCCGGCTGCAAAGCCGGCCTGGTGTTCAACCCGGCCACCCCGCTGAGC 165 Query 58148 TATCTCGATTACGTCATGGACAAACTGGATGTGATCCTGCTGATGTCCGTGAACCCAGGC 58207 || || || |||| |||||||| | || || | ||| | ||||| |||||||| ||| Sbjct 164 TACCTGGACCACGTGATGGACAAGATCGACATGGTGCTGATCATGTCGGTGAACCCCGGC 105 Query 58208 TTCGGCGGCCAGTCTTTTATTCCGCAGACGCTGGATAAACTGCGCGAAGTGCGTCGCCGC 58267 || ||||||||| || || ||||| | ||||| ||| |||||| | || | ||| Sbjct 104 TTTGGCGGCCAGAAGTTCATCCCGCACGCACTGGAAAAAGTGCGCGCCGCACGCCAGCGC 45 Query 58268 ATTGA 58272 ||||| Sbjct 44 ATTGA 40 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 470942308569320