Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq15664 91.5 1e-13 >seq15664 Length=8101 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 111718 ATGTGATTTAAATAAACATGCGCATCTCCTATACAATGGATCAATTCCCAAGGCTCCAAA 111777 ||||| |||||||| || || | |||||| || || || || || | | || || Sbjct 6689 ATGTGGTTTAAATAGACGTGAGTATCTCCCATGACGTGAATAAACTCACCACACTTTAAG 6630 Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837 | | |||||||| | |||||| | | ||||| ||||| || || |||||| Sbjct 6629 GAACACACTTGTGCAATTAAACGTGTGAGCAAAGCATAACTGGCAATATTGAACGGCACA 6570 Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACA 111897 || ||||||||||| | |||||||| || | ||||| || || | | |||| Sbjct 6569 CCGAGGCCCATATCGGCTGATCTTTGGTACATTTGACAAGAGAGCTCTCCATCCACCACA 6510 Query 111898 TAAAATTGACAAAGTACATGACAAGGAGGCAATGCCAT 111935 |||||||| |||| | ||||||||| ||||| ||||| Sbjct 6509 TAAAATTGGCAAAACATATGACAAGGGGGCAAAGCCAT 6472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391702893688867