Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq19824 127 2e-24 seq38859 120 3e-22 seq35091 118 1e-21 seq45780 111 2e-19 seq49792 102 9e-17 seq25271 102 9e-17 seq45910 100 3e-16 seq29189 100 3e-16 seq48569 96.9 4e-15 seq19397 96.9 4e-15 seq1246 93.3 5e-14 seq45884 91.5 2e-13 seq27925 89.7 6e-13 seq50756 87.8 2e-12 seq35349 87.8 2e-12 seq7650 87.8 2e-12 seq28421 86.0 7e-12 seq40549 84.2 2e-11 >seq19824 Length=8713 Score = 127 bits (140), Expect = 2e-24 Identities = 175/241 (73%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 27393 AAATATTACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGA 27452 |||||| |||||| | | |||||| ||||| | ||||| || || ||||| | || Sbjct 7399 AAATATACGTATAAT--ATAGCTTTGTGAAGACTTTAACCGGAAAAACCATTACGTTGGA 7342 Query 27453 GGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAAT 27512 || || | |||| || ||| |||| || ||||||||||| || |||||||| Sbjct 7341 TGTGGAACCCAACGATACAATCCAAAACGTGAAAGCCAAAATTCAGGATAAAGAGGGAAT 7282 Query 27513 TCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT 27572 ||||||||| || || ||||| || ||||| || |||||| | || || | ||| || | Sbjct 7281 TCCTCCAGAGCAACAACGTCTGATCTTTGCAGGAAAGCAATTGGAAGACGGTCGCACTTT 7222 Query 27573 -AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTG 27631 ||| |||||||| ||||||||||| ||| | ||| | || |||||| | || |||| Sbjct 7221 GAGC-GACTATAACATCCAAAAGGAAAGCACCTTGCATTTGGTGTTGCGTTTACGTGGTG 7163 Query 27632 G 27632 | Sbjct 7162 G 7162 Score = 111 bits (122), Expect = 2e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| | || || || || ||||| | || ||||| | Sbjct 6328 ATGCAAATCTTCGTTAAGACTTTGACTGGAAAAACAATTACGTTGGACGTTGAACCCAAC 6269 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| ||| | || || |||||||| || ||||| |||||||||||||| || Sbjct 6268 GACACCATCCAGAATGTCAAAGCCAAAATTCAAGATAAGGAAGGAATTCCTCCAGAGCAA 6209 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| |||||||||| || || ||| | ||||||| || || | ||||| || Sbjct 6208 CAACGTTTAATTTTTGCGGGAAAACAATTGGAGGATGGCCGCACTTTGAGTGACTACAAC 6149 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGT 27621 ||||||| || |||| | ||| | || |||||| Sbjct 6148 ATCCAAAAAGAGAGCACTTTGCATTTGGTGTTGCGT 6113 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||| || || | ||||| || || ||||| | || || || | Sbjct 6559 ATGCAAATCTTTGTTAAAACCTTGACCGGAAAAACCATTACGTTGGACGTGGAACCCAAC 6500 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| |||| | ||||| ||||| ||||||||||| || ||||| || || || Sbjct 6499 GACACCATCCAAAATGTCAAGGCGAAAATCCAGGACAAGGAAGGTATTCCGCCTGAGCAA 6440 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 || ||||| || ||||| || || ||| | ||||||| | || | ||| ||||| || Sbjct 6439 CAACGTCTCATCTTTGCCGGCAAACAATTAGAGGATGGAAGAACTTTGAGC-GACTACAA 6381 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||| ||| || | ||| | || |||||| | || ||||| Sbjct 6380 CATCCAAAAAGAAAGTACCTTGCATTTGGTATTGCGTTTGCGTGGTGG 6333 Score = 96.9 bits (106), Expect = 4e-15 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 |||||||||||| | ||||| || || ||||| | || || || | |||| || Sbjct 7077 CTTTGTCAAGACATTGACCGGAAAAACCATTACGTTGGATGTGGAACCCAACGATACAAT 7018 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 ||| |||| || |||||||| || ||||| ||||| || || || || || ||| | Sbjct 7017 CCAAAACGTGAAAGCCAAAATTCAAGATAAGGAAGGAATCCCCCCTGAGCAACAACGTTT 6958 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAA 27592 || || || || |||||| | ||||||| || || | ||| || ||||| |||||| Sbjct 6957 GATCTTCGCCGGCAAGCAATTGGAGGATGGCCGCACTTTGAGC-GATTATAACATCCAAA 6899 Query 27593 AGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||| |||| | ||| | || |||| | || ||||| Sbjct 6898 AGGAAAGCACTTTGCATTTGGTGCTGCGATTACGTGGTGG 6859 >seq38859 Length=993 Score = 120 bits (132), Expect = 3e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| || ||||| || |||||||| || ||||| | || |||||| | ||| | || Sbjct 632 CTTCGTGAAGACCCTGACCGGCAAAACCATTACCTTAGACGTTGAGCCCAATGACACGAT 691 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 ||| | ||||| || || || |||||||| || ||||| ||||| || ||||| | Sbjct 692 CCAAAACGTCAAGGCAAAGATCCAAGACAAGGAAGGTATTCCACCAGAGCAACAGCGCTT 751 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 ||| |||||||| |||||| | || |||| | ||| | || || ||| ||||||| Sbjct 752 AATCTTTGCTGGAAAGCAATTGGAAGATGGAAGAACCTTGAGTGATTACAATATCCAAAA 811 Query 27594 GGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||| | ||| | || |||||| | |||||||| Sbjct 812 GGAAAGCACGTTGCATTTGGTGTTGCGTTTACGCGGTGG 850 >seq35091 Length=3122 Score = 118 bits (130), Expect = 1e-21 Identities = 158/220 (72%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 |||||| || || || || || || || || || | || |||||| | ||| | || Sbjct 755 CTTTGTGAAAACTCTAACTGGGAAAACAATCACATTGGACGTTGAGCCCAATGACACGAT 814 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 |||| |||| || ||||| || |||||||| || ||||||||||| ||||| || | Sbjct 815 CCAAAATGTGAAAGCCAAAATCCAAGACAAGGAAGGCATTCCTCCAGAACAGCAACGATT 874 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 ||| ||||| || || ||| | || |||| | ||| | |||||||| ||||||| Sbjct 875 AATCTTTGCCGGAAAACAATTAGAAGATGGAAGGACCTTGAGTGACTATAACATCCAAAA 934 Query 27594 GGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 ||| ||| || ||| |||| |||||| | || |||||| Sbjct 935 AGAAAGCACGCTGCATTTAGTGTTGCGTTTACGAGGTGGA 974 Score = 111 bits (122), Expect = 2e-19 Identities = 158/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| || ||||| | || || || || ||||| | || |||||| | ||| | || Sbjct 434 CTTCGTGAAGACCTTGACTGGTAAAACCATTACCTTAGACGTTGAGCCCAATGACACGAT 493 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 ||| | ||||| || || || |||||||| || ||||| ||||| || ||||| | Sbjct 494 CCAAAACGTCAAGGCAAAGATCCAAGACAAGGAAGGTATTCCACCAGAGCAACAGCGCTT 553 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAA 27592 ||| |||||||| |||||| | || |||| | ||| | ||| || || || |||||| Sbjct 554 AATCTTTGCTGGAAAGCAATTGGAAGATGGAAGAACCTTGAGC-GATTACAACATCCAAA 612 Query 27593 AGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||| ||| | ||| |||| |||||| | |||||||| Sbjct 613 AGGAAAGCACGTTGCATTTAGTGTTGCGTTTACGCGGTGG 652 Score = 84.2 bits (92), Expect = 2e-11 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 27482 TGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTG 27541 |||| || |||||||| |||||||| || || || ||||| ||||| || | || |||| Sbjct 157 TGAAAGCCAAAATTCAAGACAAGGAAGGCATCCCACCAGAGCAGCAACGATTGATCTTTG 216 Query 27542 CTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCA 27601 | || || ||| | ||||| | || ||| || |||||||| ||||||||||| | Sbjct 217 CCGGAAAACAATTAGAGGACGGCCGAACCTTAAGTGACTATAACATCCAAAAGGAAAGTA 276 Query 27602 CTCTTCATCTAGTCTTGCG 27620 | | ||| | || ||||| Sbjct 277 CATTGCATTTGGTATTGCG 295 >seq45780 Length=809 Score = 111 bits (122), Expect = 2e-19 Identities = 149/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||||||||| || || | || || ||| | |||| || |||| | ||||| Sbjct 733 ACCGGCAAGACGATAACGTTGGACGTAGAGCCTAACGATACTATCCAAAATGTTAAGGCC 674 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 ||||||||||| || || || |||||||| || || ||||| | ||||| ||||| ||| Sbjct 673 AAAATTCAGGATAAAGAAGGCATTCCTCCTGAGCAACAGCGATTGATTTTCGCTGGCAAG 614 Query 27550 CAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608 ||| | || || | ||| || | ||| || || ||| | ||||||||| ||| | || Sbjct 613 CAATTGGAAGACGGTCGCACATTGAGC-GATTACAATATTCAAAAGGAAAGTACTTTACA 555 Query 27609 TCTAGTCTTGCGTCTTCGCGGTGGA 27633 | ||||||||||| | | |||||| Sbjct 554 TTTAGTCTTGCGTTTAAGAGGTGGA 530 >seq49792 Length=5355 Score = 102 bits (112), Expect = 9e-17 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 |||||| ||||| | || ||||| || || || | || |||||| | ||||| || Sbjct 232 CTTTGTGAAGACATTGACGGGCAAAACCATAACCTTAGACGTTGAGCCCAATGATACAAT 291 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 ||| | ||||| || || || |||||||| || ||||| ||||| || || || | Sbjct 292 CCAAAACGTTAAGGCAAAGATCCAAGACAAGGAAGGCATTCCACCAGAGCAACAACGATT 351 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAA 27592 ||| |||||||| || || | || |||| | || | ||| || || || |||||| Sbjct 352 AATCTTTGCTGGAAAACAGTTGGAAGATGGAAGAACTTTGAGC-GATTACAACATCCAAA 410 Query 27593 AGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||| ||| | ||| |||| |||||| | |||||||| Sbjct 411 AGGAAAGCACGTTGCATTTAGTATTGCGTTTACGCGGTGG 450 Score = 96.9 bits (106), Expect = 4e-15 Identities = 114/152 (75%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 27482 TGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTG 27541 |||| || ||||| ||||||||||| || ||||||||||| || || || || || |||| Sbjct 618 TGAAAGCCAAAATCCAGGACAAGGAAGGCATTCCTCCAGAGCAACAACGACTGATCTTTG 677 Query 27542 CTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAAGGAATCC 27600 | || |||||| | || |||| | ||| | ||| || ||||| ||||||| ||| | Sbjct 678 CCGGAAAGCAATTGGAAGATGGAAGGACCTTGAGC-GATTATAACATCCAAAAAGAAAGC 736 Query 27601 ACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || | ||| | || |||||| | || ||||| Sbjct 737 ACATTGCATTTGGTATTGCGTTTACGAGGTGG 768 >seq25271 Length=6169 Score = 102 bits (112), Expect = 9e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| ||| |||| |||||||||||||| ||||| || |||||||| || || Sbjct 836 GATACCATCCAAAACGTGAAAGCTAAAATTCAGGATAAGGAAGGCATTCCTCCTGAGCAA 777 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 | ||| | || |||||||| |||||| | || |||| | ||| || || |||||| Sbjct 776 TAACGTTTGATCTTTGCTGGCAAGCAATTGGAAGATGGCTGCACCTTAAGTGATTATAAT 717 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGT 27621 ||||||||||| ||| | ||| | || |||||| Sbjct 716 ATCCAAAAGGAAAGCACCTTGCATTTGGTGTTGCGT 681 >seq45910 Length=1805 Score = 100 bits (110), Expect = 3e-16 Identities = 154/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 |||||| || || || || || || || || || | || ||||| | ||| | || Sbjct 128 CTTTGTGAAAACCCTAACTGGGAAAACAATCACATTGGATGTTGAACCCAATGACACGAT 187 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 |||| |||| || || || || |||||||| || ||||||||||| ||||| || || Sbjct 188 CCAAAATGTGAAAGCCAAGATCCAAGACAAGGAAGGCATTCCTCCAGAACAGCAACGACT 247 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 ||| |||||||| || ||| | || |||| | ||| | || ||||| | ||||| Sbjct 248 AATCTTTGCTGGAAAACAATTAGAAGATGGAAGGACCTTGAGTGATTATAACATTCAAAA 307 Query 27594 GGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 ||| ||| || || | || |||||| | || |||||| Sbjct 308 AGAAAGCACGCTACACTTGGTGTTGCGTTTACGAGGTGGA 347 >seq29189 Length=1803 Score = 100 bits (110), Expect = 3e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||||||||| || | ||||| || || || || | || || ||| | ||| | ||| Sbjct 744 CTTTGTCAAAACTTTGACCGGAAAAACCATCACGTTGGATGTGGAGCCTAATGACACCAT 685 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 ||||||||| || ||||||||||| || || || |||||||| || || || || | Sbjct 684 CCAAAATTTGAAAGCCAAAATTCAGGATAATGAAGGCATTCCTCCCGAACAACAACGATT 625 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || ||||| || |||||| | || ||| ||| ||| | ||||| || ||||||| Sbjct 624 GATCTTTGCAGGCAAGCAATTAGAAGATTGTCGCACCTTGAGTGACTACAACATCCAAAA 565 Query 27594 GGAATCCACTCTTCATCTAGTCTTGCGT 27621 ||| ||| | ||| | ||||| ||| Sbjct 564 AGAAAGTACTTTACATTTGGTCTTACGT 537 Score = 82.4 bits (90), Expect = 9e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||||||||| || || | || || || | |||| || |||| | || || Sbjct 1018 ACCGGCAAGACAATCACGTTGGACGTATAGACCAACGATACTATCCAAAATGTTAATGCC 959 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 ||||| ||||||||||| ||||||||| || || || || ||||||| ||||| || Sbjct 958 AAAATCCAGGACAAGGAAGGAATTCCTAATGATCAACAACGCTTAATTTTCGCTGGCAAA 899 Query 27550 CAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608 ||| | || || | | || | ||| || || || ||||||||||| ||| | || Sbjct 898 CAATTAGAAGACGGCTGCACATTGAGC-GATTACAACATCCAAAAGGAAAGCACCTTGCA 840 Query 27609 TCTAGTCTTGCGTCTTCGCGGTGG 27632 | | |||||||| | || ||||| Sbjct 839 TTTGGTCTTGCGATTACGTGGTGG 816 >seq48569 Length=404 Score = 96.9 bits (106), Expect = 4e-15 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 27482 TGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTG 27541 |||| || ||||| ||||| ||| | || |||||||| || || ||||| |||| |||| Sbjct 149 TGAAAGCCAAAATCCAGGATAAGTAAGGTATTCCTCCTGAGCAACAGCGATTAATCTTTG 208 Query 27542 CTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCA 27601 | || |||||| | ||||||| | ||||| || ||||| ||||||||||| || Sbjct 209 CCGGCAAGCAATTGGAGGATGGCTGCACCCTGATCGATTATAACATCCAAAAGGAAAGCA 268 Query 27602 CTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | | ||| | || |||||| | || ||||| Sbjct 269 CCTTGCATTTGGTGTTGCGTTTACGAGGTGG 299 >seq19397 Length=4183 Score = 96.9 bits (106), Expect = 4e-15 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| || ||||| | || || || || ||||| | || |||||| | || | ||| Sbjct 3899 CTTCGTGAAGACTTTGACTGGAAAAACAATTACGTTGGATGTTGAGCCCAACGACACCAT 3958 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 ||| | || || ||||||||||||||||| |||||||| || || || || ||| | Sbjct 3959 CCAAAACGTCAAAGCGAAAATTCAGGACAAGGAAGGAATTCCCCCTGAGCAACAACGTTT 4018 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAA 27592 || ||||| || |||||| | ||||| | || || | ||| || || || |||||| Sbjct 4019 GATCTTTGCCGGCAAGCAATTGGAGGACGGCCGAACTTTGAGC-GATTACAACATCCAAA 4077 Query 27593 AGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||| ||| | ||| | || |||||| | || ||||| Sbjct 4078 AAGAAAGCACCTTGCATTTGGTGTTGCGTTTGCGAGGTGG 4117 >seq1246 Length=3490 Score = 93.3 bits (102), Expect = 5e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || |||||||| || || | || || ||| || |||| || |||| | ||||| Sbjct 85 ACTGGCAAGACAATCACGTTGGATGTAGAGCCAAACGATACTATCCAAAATGTTAAGGCC 144 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || ||||||||||| |||||| | ||||| || ||||| | ||||| ||| | ||| Sbjct 145 AAGATCCAGGACAAGGAAGGAATTTC-CCAGAGCAACAGCGGTTGATTTTCGCTAGCAAG 203 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || | || || | || ||| | ||||| || | ||||||||| ||| || ||| Sbjct 204 -AATTGGAAGACGGCCGCACCTTGAGTGACTACAACATTCAAAAGGAAAGCACCCTGCAT 262 Query 27610 CTAGTCTTGCGTCTTCGCGGTGGAC 27634 | ||||||||| | | ||||||| Sbjct 263 TTGGTCTTGCGTTTGAGAGGTGGAC 287 >seq45884 Length=997 Score = 91.5 bits (100), Expect = 2e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| || ||||| | || || || || |||| | || ||||| | || | ||| Sbjct 362 CTTCGTGAAGACTTTGACTGGAAACACAGTTACGTTGGACGTTGAACCCAACGACACCAT 421 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 |||| | || || |||||||||||||| || |||||||| ||||| || |||||| | Sbjct 422 CCAAAATGTCAAAGCGAAAATTCAGGACAATGAAGGAATTCCCCCAGAGCAACAGCGTTT 481 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || ||||| || |||||| | |||||| || || | || ||||| | ||||| Sbjct 482 GATCTTTGCCGGCAAGCAATTGTAGGATGGCCGAACTTTGAGTGATTATAACATTCAAAA 541 Query 27594 GGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTG 27631 |||| ||| | || | || |||||| | || |||| Sbjct 542 GGAAAGCACCTTGAATTTGGTGTTGCGTTTACGAGGTG 579 >seq27925 Length=8008 Score = 89.7 bits (98), Expect = 6e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 27482 TGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTG 27541 ||||||| ||||| || |||||||| || ||||| ||||| ||||| || | || |||| Sbjct 7777 TGAAGGCCAAAATCCAAGACAAGGAAGGCATTCCACCAGAGCAGCAACGATTGATCTTTG 7836 Query 27542 CTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCA 27601 | || |||||| | ||||||| ||| ||| | || || || ||||||||||| || Sbjct 7837 CCGGAAAGCAATTGGAGGATGGTCGAACCTTGAGTGATTACAACATCCAAAAGGAAAGCA 7896 Query 27602 CTCTTCATCTAGTCTTGCG 27620 | | || | || ||||| Sbjct 7897 CATTGCACTTGGTATTGCG 7915 >seq50756 Length=522 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 27484 AAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCT 27543 || || ||||||||||| || || || ||||||| || ||||| ||| | |||||||| Sbjct 324 AAAGCCAAAATTCAGGATAATGAAGGCATTCCTCATGAACAGCAACGTTTGATTTTTGCC 265 Query 27544 GGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAAGGAATCCAC 27602 || || ||| | || || | |||||| | ||| || ||||| | ||||| ||| ||| Sbjct 264 GGCAAACAATTGGATGACGGTCGTACTTTGAGC-GATTATAACATTCAAAAAGAAAGCAC 206 Query 27603 TCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||| | ||||||||| | || ||||| Sbjct 205 CTTGCATTTGGTCTTGCGTTTACGAGGTGG 176 >seq35349 Length=2359 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 27492 AATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCA 27551 |||||||||||| || || |||||||| || || || ||| | || ||||| || || || Sbjct 308 AATTCAGGACAATGAAGGCATTCCTCCTGAACAACAACGTTTGATCTTTGCCGGCAAACA 367 Query 27552 ACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCT 27611 | | ||||||| ||||| | || ||||| ||||||| ||| ||| || ||| | Sbjct 368 ATTGGAGGATGGCCGTACTTTGAGTGATTATAACATCCAAAAAGAAAGCACCCTGCATTT 427 Query 27612 AGTCTTGCGTCTTCGCGGTGG 27632 ||||||||| | || |||| Sbjct 428 GGTCTTGCGTTTACGATGTGG 448 >seq7650 Length=7814 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 80908 GACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCAC 80967 ||||||| ||||||||| ||||| || || | | ||| |||| || |||||||||||| Sbjct 2908 GACGCCAAATTGCACACTGCCACTTCGTCCGGAGATGTGTACTCCACAATTTCCGTGCAC 2967 Query 80968 AAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTT 81005 ||||| || ||||| ||||| |||| || || ||||| Sbjct 2968 AAATTCGATGACTTTATTGTGCCCAAATTCTTTTGGTT 3005 >seq28421 Length=944 Score = 86.0 bits (94), Expect = 7e-12 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| || || || | ||||| || || ||||| | || |||||| | ||||| || Sbjct 499 CTTCGTGAAAACTTTAACCGGAAAAACAATTACGTTGGATGTTGAGCCCAATGATACGAT 440 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| ||||| || ||||| || |||||||| || ||||||||||| || || || | Sbjct 439 TCAAAACTTGAAAGCCAAAATCCAAGACAAGGAAGGCATTCCTCCAGAGCAACAACGATT 380 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGA 27560 ||| ||||| || || ||| | || || Sbjct 379 AATATTTGCCGGAAAACAATTGGAAGA 353 >seq40549 Length=748 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||| ||||| || || | || || ||| | |||| || |||| | || || Sbjct 153 ACCGGTAAGACGATCACGTTGGACGTAGAGCCCAACGATACTATCCAAAATGTTAAAGCC 212 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 ||||||||||| || || || |||||||| || || ||||| | ||||| ||||| ||| Sbjct 213 AAAATTCAGGATAAAGAAGGCATTCCTCCTGAGCAACAGCGATTGATTTTCGCTGGCAAG 272 Query 27550 CAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608 ||| | || || | ||| || | ||| ||||| || | ||||||||| ||| | || Sbjct 273 CAATTGGAAGACGGTCGCACATTGAGC-GACTACAACATTCAAAAGGAAAGTACTTTACA 331 Query 27609 TCTAGTCTTGCGTCTTCGCGGTGGA 27633 | || ||||| | | |||||| Sbjct 332 CTTGGTGTTGCGCTTAAGAGGTGGA 356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569948188736080