Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= NC_028961.1 Length=55094 Score E Sequences producing significant alignments: (Bits) Value seq18560 86.0 2e-12 >seq18560 Length=3023 Score = 86.0 bits (94), Expect = 2e-12 Identities = 118/163 (72%), Gaps = 8/163 (5%) Strand=Plus/Minus Query 40880 AAGAACCTGCTCGGCATCCCGTGGTGCGTCGCATTCGCACTCCGAGACGACGGCTGGATT 40939 ||| || || ||||||| |||||| | | || ||||| | | || || |||||| | Sbjct 281 AAGGACTTGATCGGCATTCCGTGGCGGCTGGCGTTCGCCTTGCAGGATGATGGCTGGTAT 222 Query 40940 CTGCGCAACGACATCATCTGGCACAAGCCAAACGGCATGCCAGAGAGCGT----TACCGA 40995 ||||||| ||||| | ||| |||||||||||| ||||| |||||||| | || Sbjct 221 CTGCGCAGTGACATTGTGTGGAACAAGCCAAACGCGATGCCCGAGAGCGTCAAGGATCGC 162 Query 40996 CCGGCTTGCCTCCAAGCATGAGTACGTGTTCATGTTCAGCAAG 41038 |||||| | ||| |||||||| | |||||| ||| |||| Sbjct 161 CCGGCTCG-CTC---GCATGAGTTTCTATTCATGCTCACCAAG 123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 176072901068448