Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq15664 91.5 1e-13 >seq15664 Length=8101 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 118464 TTTCAGTGGCTCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTC 118523 ||||| || || ||||| || | |||||| |||| ||| || || || || || || Sbjct 6702 TTTCAACGGTTCGATGTGGTTTAAATAGACGTGAGTATCTCCCATGACGTGAATAAACTC 6643 Query 118524 ACCAGG-TGTAAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTA 118582 |||| | |||| || || ||||| | ||| | |||| || ||||| | Sbjct 6642 ACCACACTTTAAGGAACA-CACTTGTGCAATTAAACGTGTGAGCAAAGCATAACTGGCAA 6584 Query 118583 CATTAAAAGGAACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCT 118642 ||| || || ||||| || ||||| || |||||||| ||||||| ||| |||||||||| Sbjct 6583 TATTGAACGGCACACCGAGGCCCATATCGGCTGATCTTTGGTACATTTGACAAGAGAGCT 6524 Query 118643 CCCCGTTTGCAACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCAT 118694 | || | | |||||||| || | | || ||||| || |||| | |||| Sbjct 6523 CTCCATCCACCACATAAAATTGGCAAAACATATGACAAGGGGGCAAAGCCAT 6472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414220141588276