Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq12010 82.4 7e-11 >seq12010 Length=13650 Score = 82.4 bits (90), Expect = 7e-11 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 4547 ACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAA 4606 ||| || |||||| ||||| |||||||| | ||||| ||||| || |||||| | Sbjct 5637 ACAAGCGAAATCAGTGTGCAATCCTTCGTCACGACTAATTAGTTCATTGCTAAACGTAAG 5696 Query 4607 TCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAA 4666 || ||||| ||||| | ||| || ||||||||||| || |||||| || || || Sbjct 5697 GCCTGGCATCAAACCACGCTTCTTTAGCCAAAATATTGCACAAAATGATCCGCTGAAAAA 5756 Query 4667 TATGCCTTCTACGGCGGCAAACGCTACTAATCG 4699 ||| || ||||| ||| | || || ||||| Sbjct 5757 TATTCCCTCTACACACGCATAAGCAACCAATCG 5789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426785156074397