Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Reticulomyxa_20filosa_20[genbank_20GCA_5F000512085.1_202013-12-30] 50,809 sequences; 101,867,045 total letters Query= NC_031077.1 Length=41760 Score E Sequences producing significant alignments: (Bits) Value seq16859 131 4e-26 >seq16859 Length=703 Score = 131 bits (144), Expect = 4e-26 Identities = 320/476 (67%), Gaps = 13/476 (3%) Strand=Plus/Minus Query 7225 CGGCATGCTGGAAACCTACGCTGAAATCGATAAATCTCTGGCTGATCTGAACGGCAATAC 7284 ||||||||| || ||||| | || ||||| || | ||||| || || |||||||| || Sbjct 662 CGGCATGCTCGAGACCTATTCGGAGATCGACAAGGCGCTGGCCGACCTCAACGGCAACAC 603 Query 7285 TGCTGAATTC-CGCCTGTCTGAAGACCGTGCATTTATCGAAGCGATGAATCAGCAGATGG 7343 || || || |||||||| || ||||| || || |||| | | ||| |||||| | | Sbjct 602 GGC-GACTTATCGCCTGTCCGAGGACCGCGCCTTCCTCGAGGGGCTGACGCAGCAGCTCG 544 Query 7344 CGCAGACGCTTTTTTATGGCGACTCCAGCGTA-AATCCTCAGCAGTTTATGGGCCTTTCA 7402 | | ||| || || ||| || || ||| ||||| | | || ||||| | | Sbjct 543 CCGGGGTGCTGTTCTACGGCAACACC-GCGACCAATCCCGAACGCTTCATGGGGTTCGCG 485 Query 7403 TCTCGCTATTCCAGT--CT----GTCTGC-TGGCAACGCGC--AGAACATTATCGATGCA 7453 | ||||| || || ||| | | ||| ||| | ||| | |||| | Sbjct 484 CCGCGCTACAACACGACCTCGACGTCGACGTCGCAGACCGCCAACAACTTCATCGCGGGC 425 Query 7454 GGCGGTACCGGTACAGATAACACCTCTATCTGGCTGGTTGTTTGGGGTGAAAATACTGTT 7513 |||||| | || | || ||||| || ||||||||||| | ||||| || ||| || Sbjct 424 GGCGGTTCGGGCTCCGACAACACGTCGATCTGGCTGGTCGGCTGGGGCGATCTTACCGTG 365 Query 7514 CACGGCATTTTCCCGAAAGGCCAGAAAGCTGGTTTGCAGATGGAAGATAAAGGGCAGCAG 7573 |||||||| ||||| || ||| || || || || |||| |||| || ||||| Sbjct 364 CACGGCATCTTCCCCAAGGGCAGCAAGGCCGGGCTGTCGATGAAAGACCTCGGCGAGCAG 305 Query 7574 ACACTGAAAGATGCCGCTGGTGGTCAGTACGAAGGCTACCGTACCCATTACAAGTGGGAT 7633 || ||| || || || || || ||| | |||||||| ||||| ||||||||||| Sbjct 304 ACGCTGCTCGACGCGGCCGGCAATCGCTACCAGGGCTACCGCACCCACTACAAGTGGGAC 245 Query 7634 AACGGTCTTTCCCTTCGTGACTGGCGTTACGTTGTGCGCATTGCAAACATCGATGT 7689 ||| || | | || || ||||| || || |||||||| | |||||||| || Sbjct 244 GCCGGCCTCACGGTGCGCGATTGGCGCTATGTCGTGCGCATCGGCAACATCGACGT 189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133429845582276