Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizaria_20sp._20SCN_2062-66_20[genbank_20GCA_5F001724265.1_202016- 09-13] 714 sequences; 34,916,453 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq53 84.2 5e-11 >seq53 Length=108086 Score = 84.2 bits (92), Expect = 5e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 230170 TCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGT 230229 ||||| |||||||| ||||||| || | || || || || || | || ||||| Sbjct 12816 TCGTTCGCCGAGCGCCTCGTCGGCTTCGCCTGCGTCGAGGGCATCTTCTTCTCCGGCTCC 12875 Query 230230 TTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAAC 230289 |||||||||||||| ||||| ||| || |||||| || ||| | || ||| Sbjct 12876 TTCTGCGCCATCTTCTGGCTCAAGAAGCGCGGCAAGATGCCCGGACTCACCTTCTCCAAC 12935 Query 230290 GAGTTCATCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAA 230348 ||| ||||| ||||||||||| ||||| || | | |||| | || | || || | Sbjct 12936 GAGCTCATCTCGCGCGACGAGGGCCTCCA-CACCGACTTCGCCTGCCTGCTCTACTCCAT 12994 Query 230349 GCTCCAGAACAAGCT 230363 ||||||| ||||||| Sbjct 12995 GCTCCAGCACAAGCT 13009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057814322893820