Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizaria_20sp._20SCN_2062-66_20[genbank_20GCA_5F001724265.1_202016- 09-13] 714 sequences; 34,916,453 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq53 84.2 2e-11 >seq53 Length=108086 Score = 84.2 bits (92), Expect = 2e-11 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 16960 CAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGT 17019 ||| || ||||| ||| || | |||||||| | ||| || ||||| || || || Sbjct 12983 CAGGCAGGCGAAGTCGGTGTGGAGGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGT 12924 Query 17020 CAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAA 17079 | ||||||||||| || || ||||| | ||| || || ||| ||| || || || || Sbjct 12923 GAGTCCGGGCATCTTGCCGCGCTTCTTGAGCCAGAAGATGGCGCAGAAGGAGCCGGAGAA 12864 Query 17080 GAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGC 17130 ||| || ||||||||| | || || ||| | || |||||| ||| ||| Sbjct 12863 GAAGATGCCCTCGACGCAGGCGAAGCCGACGAGGCGCTCGGCGAACGACGC 12813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517540980905520