Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizaria_20sp._20SCN_2062-66_20[genbank_20GCA_5F001724265.1_202016- 09-13] 714 sequences; 34,916,453 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq285 104 2e-17 >seq285 Length=65808 Score = 104 bits (114), Expect = 2e-17 Identities = 109/141 (77%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 33577 ATGGGCGACAAGTTTGCATCGTTC-ACGGCCCAGAAGGGCACGTGCGGCATGATGTACGA 33635 || || |||||||| || ||| | |||||| ||||||| || ||||| |||| |||| Sbjct 33009 ATCGGTGACAAGTTCGCCTCGCGCCACGGCC-AGAAGGGTACCTGCGGTATGACGTACCG 32951 Query 33636 CCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAACCCGCA 33695 |||| ||||||||||||||| ||| ||| | || ||||| ||||||||||||| Sbjct 32950 CCAGGAGGACATGCCGTTCACCATCGAAGGCATCACGCCCGACCTGATCATCAACCCGCA 32891 Query 33696 TGCGTTCCCCTCGCGCATGAC 33716 || |||| ||||||||||| Sbjct 32890 CGCCATCCCGTCGCGCATGAC 32870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356230500099742