Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizaria_20sp._20SCN_2062-66_20[genbank_20GCA_5F001724265.1_202016- 09-13] 714 sequences; 34,916,453 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq429 96.9 2e-15 >seq429 Length=23534 Score = 96.9 bits (106), Expect = 2e-15 Identities = 226/338 (67%), Gaps = 5/338 (1%) Strand=Plus/Minus Query 25497 GTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCG 25556 || ||| ||||| |||| |||| || || |||| |||||||| ||||| || || Sbjct 6498 GTGACGCGAGCCAGCATGCACGTCAGCAGCGCGTAGGACGCGATGTTGAAGGGCACGCCC 6439 Query 25557 AACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTA 25616 | |||||| || | | | |||||||||| | ||||||||||| |||| ||||| Sbjct 6438 AGCCCCATATCGGCGCTGCG-CTGGTAGAGCAGGCACGAGAGCTCGCCGTCCGAGACGTA 6380 Query 25617 AAACTGACACATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCTTTAGGGTTCCA 25676 ||||| | | || |||||| || || || || ||||| ||| |||||||| Sbjct 6379 GAACTGCGAGAGCACGTGGCACGGTGGCAGCGCCATCTTGCCCAGGTCCGCCGGGTTCCA 6320 Query 25677 GGCGCACACGATGATGCACCTGTCTTCTGGGTTGTCCCTGATAAGATCCG--CGGTGTTT 25734 || ||| |||||||| || || ||||| | | | | | || | || Sbjct 6319 CGCCGACATGATGATGCGCCGCGAGTCGGGGTTCTGGC--GCAGGGTGCGCACAACGTCG 6262 Query 25735 TGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCG 25794 |||||| ||||| ||| | |||| |||||| || ||| |||| || ||| Sbjct 6261 GCCAGCTGGTCCACGCCCTTGCCCGTGTAGTCGGCGTGGCAGTCGATGTAAGGCGCACCG 6202 Query 25795 AAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 || | || ||||||||| ||||| || || || ||||| Sbjct 6201 AAGTGCCGCCACTGGAAGCCGTATACAGGACCCAGGTC 6164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340134640165122