Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizaria_20sp._20SCN_2062-66_20[genbank_20GCA_5F001724265.1_202016- 09-13] 714 sequences; 34,916,453 total letters Query= NC_009447.1 Length=52414 Score E Sequences producing significant alignments: (Bits) Value seq65 91.5 5e-14 >seq65 Length=99701 Score = 91.5 bits (100), Expect = 5e-14 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 29409 GCATCCGCGATCTGGTTCGTCAGGCGCTCTTGAACTTGCAGGCGCTTGGCGAAAATGTCT 29468 |||| ||||||||| |||||||||||||| || || |||||||| | | | || || Sbjct 98144 GCATGCGCGATCTGCTTCGTCAGGCGCTCCTGCACCTGCAGGCGGCGCGAGTACATCTCG 98203 Query 29469 GCCAGCCGCTTGAGCTTCGAAATACCGACGACTTTGCCGCTCGGGATATAGCCGATATGG 29528 | | || || ||| || | || | ||| ||||||| |||||| |||||||| || Sbjct 98204 ACGATGCGAGCGAACTTGGACAGGCCCAGGACCTTGCCGCGCGGGATGTAGCCGATGTGC 98263 Query 29529 GCCGTTCCCATGATCGCCGCCATATGGTGTTCGCA 29563 || | ||||||| || | |||| || || ||||| Sbjct 98264 ACCTTGCCCATGAACGGCACCATGTGATGCTCGCA 98298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167601778934368